Pairwise Alignments

Query, 568 a.a., two-component system sensor histidine kinase/response regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 456 a.a., two component response regulator from Agrobacterium fabrum C58

 Score = 70.1 bits (170), Expect = 2e-16
 Identities = 46/136 (33%), Positives = 73/136 (53%), Gaps = 3/136 (2%)

Query: 2   RVMIVDDHGTNRELCRFILAHIASHIDTFEDGQQAIDAMREMEILPDVILLDVMMPIKDG 61
           RV++VDD   N +L    L      + T EDG +A+    E ++  D+ILLD+MMP  DG
Sbjct: 4   RVLVVDDIPANVKLLEARLVAEYFDVVTAEDGFKALAICDEEQV--DIILLDIMMPGMDG 61

Query: 62  FVTAKEIRQAFVKHHIPIIFLTVLDDRDSFEKCLALG-DDFILKPVERSVLIAKVQAHYR 120
           F   + ++      HIP++ +T LD      + L  G DDF+ KPV    LIA+V++  R
Sbjct: 62  FEVCERLKANPNTAHIPVVMVTALDQPSDRVRGLKAGADDFLTKPVNDLQLIARVKSLVR 121

Query: 121 IVKMHNEVMEQRDELR 136
           +  + +E+  + +  R
Sbjct: 122 LKAVSDELRLRAETAR 137



 Score = 27.7 bits (60), Expect = 0.001
 Identities = 29/140 (20%), Positives = 64/140 (45%), Gaps = 7/140 (5%)

Query: 2   RVMIVDDHGTNRELCRFILAHIASHIDTFEDGQQAIDAMREMEILPDVILLDVMMPIKDG 61
           RV++ D   +++E     L  +A  +D   + Q A+  ++      ++++++      D 
Sbjct: 156 RVLVADGRASSQERIIRALKPVAE-VDAVTEPQAAL--LKAASSPFELVIVNSNFEDYDP 212

Query: 62  FVTAKEIRQAFVKHHIPIIFLTVLDDRDSFEKCLALG-DDFILKPVERSVLIAKVQAHYR 120
                + R       +P++ +      +   + L LG +D+IL+P++ + L+A+     R
Sbjct: 213 LRLCSQFRSLERTRFLPLLLVAEQGADEMVARALDLGVNDYILRPIDPNELVARSLTQIR 272

Query: 121 IVKMHNEVMEQRDELRHFRE 140
             K +NE +  R  L+H  E
Sbjct: 273 -RKRYNEHL--RLNLQHTME 289