Pairwise Alignments

Query, 704 a.a., type I secretion system permease/ATPase from Vibrio cholerae E7946 ATCC 55056

Subject, 583 a.a., peptidase from Pseudomonas simiae WCS417

 Score =  227 bits (579), Expect = 1e-63
 Identities = 155/558 (27%), Positives = 285/558 (51%), Gaps = 20/558 (3%)

Query: 147 IYKSKHIYRDVLIA----SLLINLFAVAAPMFSRIVYDKVVPNLAFETLWVLSSGILVIF 202
           ++K+   Y+ +LI+    + LINL  +   ++   VYD+V+ +    TL +L+  ++  F
Sbjct: 10  LFKALGEYKRILISVGCFTALINLLMLVPSIYMLQVYDRVLSSQNETTLVMLTLMVVGFF 69

Query: 203 LFDFVFKMLRSYFIDVAGKKSDILISSKLFSKVMGIRMEARPPSVGAFARHLQEFESIRE 262
            F    + +RS+ +   G + +   + +++       ++      G   + L +   IR+
Sbjct: 70  AFIGTLEAIRSFIVIRIGSQLERRFNLRVYKAAFERNLQRGQGHAG---QSLGDLTHIRQ 126

Query: 263 FFTSATISSLIDLPFALLFLVLIWLMAGHLVWVPVIGVLILVIYSFLIQSRLKRAIEEGS 322
           F T   + +  D P+  L+L +I+L    L  +   G ++L+  + L +   K+ + E S
Sbjct: 127 FITGPALFAFFDAPWFPLYLFVIFLFNVWLGVLATAGAVLLIGLACLNEYLTKKPLGEAS 186

Query: 323 RLASQKYANLIESLAGLETVKLFGAQGQFQYRW---EEAVAHMANWNIKSRRITDSIQNT 379
             + Q        L   ET++  G  G  + RW         + N    +  +  S+  +
Sbjct: 187 GYSQQSTQLATSHLHNAETIQAMGMLGALRQRWFAVHSQFLGLQNQASDTGSVVTSLSKS 246

Query: 380 AGFVQQAANIGMIIVGVYLISNGDLTMGGLIAATMLSGRAIGPLVQLSLLSTRYNQAKSS 439
                Q+  +G+   G  L+  GD+T G +IA ++L GR + P+ QL  +  +++ AK +
Sbjct: 247 LRLCLQSLVLGL---GALLVIRGDMTAGMMIAGSILMGRVLSPIDQLIAVWKQWSSAKLA 303

Query: 440 MTIIEQVM-SMPDEQEEGKRYIHRPIIQGKIELDRVTFHYPNSPIASVRDLSLTIHPGEK 498
              ++ ++   P E E+ K     P  +G++  ++V+   P   +A++  +S  +  GE 
Sbjct: 304 YQRLDDLLREFPPEVEQMKL----PAPKGQVSFEQVSAGPPGRRVATLHQVSFNLVAGEV 359

Query: 499 VAIIGRIGSGKTTLERLIMGLYKPTEGHVRIDDTDISQLHHIDIRRNIGCVPQDSVLFYG 558
           + ++G  GSGK+TL R+++G++    G VR+D  DI +    D+  +IG +PQD  LF G
Sbjct: 360 LGVLGASGSGKSTLARVLVGVWPTLAGTVRLDGADIHRWDRDDLGPHIGYLPQDIELFSG 419

Query: 559 SIRDNITLGRPLSDDREVMDAANRAGVTVFTQQDPAGLERQVGEGGMLLSGGQRQSVSIA 618
           SI DNI   R  +D   V+ AA +AGV     + P G +  +G+ G  LSGGQ+Q V++A
Sbjct: 420 SIADNIARFRQ-ADPESVVRAAQQAGVHELILRLPQGYDTVLGDNGGGLSGGQKQRVALA 478

Query: 619 RAFLGRPPVLLMDEPTSAMDNRSEMHIKQQLSQLK-PSETLILITHKTSMLDVVDRVIVM 677
           RA  G P ++++DEP S +D   E  +   + Q+K    +++L+TH++S L   D+++V+
Sbjct: 479 RALYGGPRLIVLDEPNSNLDTVGEAALASAIVQMKAQGSSVVLVTHRSSALAQADKLLVL 538

Query: 678 EKGCIIADGPKHEVLNDL 695
            +G + A GP  EVL  L
Sbjct: 539 SEGHLQAFGPSQEVLRAL 556