Pairwise Alignments

Query, 704 a.a., type I secretion system permease/ATPase from Vibrio cholerae E7946 ATCC 55056

Subject, 673 a.a., Efflux ABC transporter, permease/ATP-binding protein Reut_A2584 from Variovorax sp. SCN45

 Score =  204 bits (519), Expect = 1e-56
 Identities = 161/596 (27%), Positives = 285/596 (47%), Gaps = 44/596 (7%)

Query: 131 SPEVLKPRDGH---------------WFWSTIYKSKHIYRDVLIASLLINLFAVAAPMFS 175
           +PEV++  DG                W    + +    YR  LI   ++ L + AA +  
Sbjct: 39  TPEVIEAADGDDLAGADAERQSPPSTWVLLRLGRFAKPYRKQLILGFVLTLISTAATLVP 98

Query: 176 R-----IVYDKVVP---NLAFETLWV--LSSGILVIFLFDFVFKMLRSYFIDVAGKKSDI 225
                 ++ D ++P       +T+ V     G+LV  L  +     R+Y + +  ++   
Sbjct: 99  PYLTIPLMDDILIPFQNGQKIDTMRVGLYLGGLLVAALVGWGLGWARTYLLALVSERIGA 158

Query: 226 LISSKLFSKVMGIRME--ARPPSVGAFARHLQEFESIREFFTSATISSLIDLPFALLFLV 283
            + +  +  ++ + ++      +    AR   E + I  F +   +    D+   ++  V
Sbjct: 159 DLRTTTYEHLLTLPLDYFGGKRTGDLMARIGSETDRINVFLSLHALDFANDVLMIVMTAV 218

Query: 284 LIWLMAGHLVWVPVIGVLILVIYSFLIQSRLKRAIEEGSRLASQKYANLIESLAGLETVK 343
           ++  +   L  V ++ +  +     +++ RL+   E+  R+ S+    L +++ G+  VK
Sbjct: 219 ILISINPLLAVVTLVPLPFIAWMIHVVRDRLRTGFEKIDRVWSEVTNVLADTIPGIRVVK 278

Query: 344 LFGAQGQFQYRWEEAVAHMANWNIKSRRITDSIQNTAGFVQQAANIGMIIV---GVYLIS 400
            F  + +   R+  A A+    N K  R       T   + +   IG+++V   G++ ++
Sbjct: 279 AFAQERREAERFRVANAYNLQVNDKLNRTWSLFTPTVSLLTE---IGLLVVWAFGIWQVA 335

Query: 401 NGDLTMGGLIAATMLSGRAIGPLVQLSLLSTRYNQA----KSSMTIIEQVMSMPDEQEEG 456
            G +T+G L A     GR    L  +S + +   +A    K    I++ V ++P+     
Sbjct: 336 RGSITVGVLTAFIAYIGRFYTRLDSMSRIVSVTQKAAAGAKRIFDILDHVSNVPEPANPV 395

Query: 457 KRYIHRPIIQGKIELDRVTFHYPNSPIASVRDLSLTIHPGEKVAIIGRIGSGKTTLERLI 516
           K  + R  +QG+IE+  + F Y +  +  + DL L I PGE + ++G  GSGK+TL  LI
Sbjct: 396 K--VER--VQGRIEMSGLGFRYGSRAV--IHDLDLVIEPGEMIGLVGHSGSGKSTLVNLI 449

Query: 517 MGLYKPTEGHVRIDDTDISQLHHIDIRRNIGCVPQDSVLFYGSIRDNITLGRPLSDDREV 576
              Y  T+G +++D TDI +    D RR++G V Q+  LF+G+I  NI  G+P +   E+
Sbjct: 450 CRFYDVTDGAIKVDGTDIRRFAVADYRRHVGLVLQEPFLFFGTIAQNIAYGKPDATREEI 509

Query: 577 MDAANRAGVTVFTQQDPAGLERQVGEGGMLLSGGQRQSVSIARAFLGRPPVLLMDEPTSA 636
           + AA  A    F  +   G +  VGE G  LSGG+RQ +SIARA L  P +L++DE TSA
Sbjct: 510 VAAARAAHAHDFILRLQHGYDSLVGERGQGLSGGERQRISIARALLIDPRILILDEATSA 569

Query: 637 MDNRSEMHIKQQLSQLKPSETLILITHKTSMLDVVDRVIVMEKGCIIADGPKHEVL 692
           +D  +E  I++ L  L    T I I H+ S L   DR++VM++G ++  GP H+ L
Sbjct: 570 VDTETEKEIQKALDNLVQGRTTIAIAHRLSTLRKADRLVVMDRGEVVEVGP-HDAL 624