Pairwise Alignments

Query, 704 a.a., type I secretion system permease/ATPase from Vibrio cholerae E7946 ATCC 55056

Subject, 611 a.a., ABC transporter ATP-binding protein from Vibrio cholerae E7946 ATCC 55056

 Score =  193 bits (490), Expect = 2e-53
 Identities = 146/519 (28%), Positives = 246/519 (47%), Gaps = 26/519 (5%)

Query: 189 ETLWVLSSGILVIF-LFDFVFKMLRSYFIDVAGKKSDILISSKLFSKVMGIRMEARPPSV 247
           E LW +++ +LV+  +   V  ML    I +      I  S+  +     I    R  + 
Sbjct: 83  ERLWTMAALVLVVMPILALVHSMLLHQTI-LGNYPMSIRWSTHRYLLKQSIGFFQRDFAG 141

Query: 248 GAFARHLQEFESIREFFTSATISSLIDLP-FALLFLVLIWLMAGHLVWVPVIGVLILVIY 306
               + +Q   S+RE     T+  L+DL  +  +++V + +M      + V+ +L+ +++
Sbjct: 142 RVATKVMQNANSVRE-----TVLKLVDLSVYIAVYMVSMLVMIAEADKILVVPILVWLLF 196

Query: 307 SFLIQ----SRLKRAIEEGSRLASQKYANLIESLAGLETVKLFGAQGQFQYRWEEAVAHM 362
              IQ     RLK    + +   SQ    ++++   + TVKLF    +     +  +   
Sbjct: 197 YIAIQVYFVPRLKTISTDQANAQSQMTGRIVDTYTNITTVKLFSHSQRETTYAKSGMKQF 256

Query: 363 ANWNIKSRRITDSIQNTAGFVQQAANIGMIIVGVYLISNGDLTMG----GLIAATMLSGR 418
            +   +  R   S+  +   +       +  + + L     +T+G    G+  A  + G 
Sbjct: 257 LHTVYRQMRTLTSLLYSVDLINYLLLFSIAALSIQLWLAETVTVGVIAIGITIALRMQGM 316

Query: 419 AIGPLVQLSLLSTRYNQAKSSMTIIEQVMSMPDEQEEGKRYIHRPIIQGKIELDRVTFHY 478
           +   + ++  L         SM  I   + + D  +     +      G++   +V F Y
Sbjct: 317 SKWIMWEIRALFESVGTVIDSMNTIANPVEIEDRPQAKSLQVKF----GELSFSQVRFGY 372

Query: 479 PNSPIASVRDLSLTIHPGEKVAIIGRIGSGKTTLERLIMGLYKPTEGHVRIDDTDISQLH 538
            ++      DL+L I  GEKV I+GR G+GK+TL  L++  Y    G +RID  DIS + 
Sbjct: 373 -SAQKTVFDDLNLVIQAGEKVGIVGRSGAGKSTLVNLLLRFYDVQSGQIRIDGQDISHVS 431

Query: 539 HIDIRRNIGCVPQDSVLFYGSIRDNITLGRPLSDDREVMDAANRAGVTVFTQ-----QDP 593
              +RR+IG + QD+ L + SIRDNI  G P +D   + +AA +A    F Q     Q  
Sbjct: 432 QESLRRHIGMITQDTSLLHRSIRDNILYGNPDADQAAIEEAARQAHAHDFIQELQDEQGR 491

Query: 594 AGLERQVGEGGMLLSGGQRQSVSIARAFLGRPPVLLMDEPTSAMDNRSEMHIKQQLSQLK 653
            G + QVGE G+ LSGGQRQ ++IAR  L   P+L+MDE TSA+D+  E  I++ L  L 
Sbjct: 492 TGYDVQVGERGVKLSGGQRQRIAIARVLLKNAPILIMDEATSALDSEVESAIQENLHTLM 551

Query: 654 PSETLILITHKTSMLDVVDRVIVMEKGCIIADGPKHEVL 692
             +T+I I H+ S +  +DR+IVM++G I+  G   E+L
Sbjct: 552 AGKTVIAIAHRLSTIAAMDRLIVMDEGKIVEQGTHQELL 590