Pairwise Alignments

Query, 704 a.a., type I secretion system permease/ATPase from Vibrio cholerae E7946 ATCC 55056

Subject, 606 a.a., type I secretion system ATPase from Magnetospirillum magneticum AMB-1

 Score =  320 bits (819), Expect = 2e-91
 Identities = 189/557 (33%), Positives = 302/557 (54%), Gaps = 7/557 (1%)

Query: 142 WFWSTIYKSKHIYRDVLIASLLINLFAVAAPMFSRIVYDKVVPNLAFETLWVLSSGILVI 201
           W  + I   + + R++L ASL INL A+A P+F   VYD+V+ +    TL  L  G+ V+
Sbjct: 8   WLKTVIEPLRPVMRELLAASLFINLMALAVPIFVMQVYDRVIGHNGTATLKGLVIGVGVL 67

Query: 202 FLFDFVFKMLRSYFIDVAGKKSDILISSKLFSKVMGI---RMEARPPSVGAFARHLQEFE 258
             FD++ +  R   +  A  + D+ I +KLF K+M +    +E+RP S   +    ++ +
Sbjct: 68  MAFDWIIRTSRGRIMQTAALRIDVEIGTKLFDKIMHLPLRTLESRPASF--WQTLFRDVD 125

Query: 259 SIREFFTSATISSLIDLPFALLFLVLIWLMAGHLVWVPVIGVLILVIYSFLIQSRLKRAI 318
           SIR   + +T   L DLPF L+FL +I+++   L  V V+  +  ++ ++     +K + 
Sbjct: 126 SIRNTVSGSTAVLLTDLPFVLIFLGVIFIIGRPLALVFVVLFVAFLVLAWRSGGAMKEST 185

Query: 319 EEGSRLASQKYANLIESLAGLETVKLFGAQGQFQYRWEEAVAHMANWNIKSRRITDSIQN 378
            +   +   +   + E +AG  TVK        +  WEE  A     +I+   + D   N
Sbjct: 186 GKEKNVQQARDGLVAEIIAGRATVKAVALDRAIRPIWEEKQAGAIEQSIQRGAVNDEYVN 245

Query: 379 TAGFVQQAANIGMIIVGVYLISNGDLTMGGLIAATMLSGRAIGPLVQLSLLSTRYNQAKS 438
               +    ++ +  VG   I + DLTMG L+A  MLS R  GP+ QL      ++  + 
Sbjct: 246 LGQMLTMLGSVALTTVGAVFIMDHDLTMGALVACNMLSSRLYGPINQLVGAWKSFSSFRQ 305

Query: 439 SMTIIEQVMSMPDEQEEGKRYIHRPIIQGKIELDRVTFHYPNSPIASVRDLSLTIHPGEK 498
           S+  + +V +  +E+        RP   G I L+ ++F Y     A+     L IHPG  
Sbjct: 306 SVDRLGEVFAESEERRHSAIERERP--SGLITLEDISFAYDQKSQAAASIDRLEIHPGGI 363

Query: 499 VAIIGRIGSGKTTLERLIMGLYKPTEGHVRIDDTDISQLHHIDIRRNIGCVPQDSVLFYG 558
            A++GR GSGKTTL ++I+GLY P +G V +D  DI+Q    ++   +G VPQ+ VLF  
Sbjct: 364 TAVLGRNGSGKTTLLKIILGLYHPAKGRVLLDGADIAQFTRAELAGWMGYVPQECVLFNA 423

Query: 559 SIRDNITLGRPLSDDREVMDAANRAGVTVFTQQDPAGLERQVGEGGMLLSGGQRQSVSIA 618
           SIRDNI  G P + D ++++AA  AGV  +    P G    +GE G  LS GQRQ ++IA
Sbjct: 424 SIRDNIVYGAPGASDEDILEAAKVAGVHQYIIDLPDGYGTSIGEAGSRLSAGQRQRIAIA 483

Query: 619 RAFLGRPPVLLMDEPTSAMDNRSEMHIKQQLSQLKPSETLILITHKTSMLDVVDRVIVME 678
           RA LG PPVLL+DEP++++D ++E  ++  L++L  + T+I++TH   +L +   V+V++
Sbjct: 484 RALLGNPPVLLLDEPSASLDRQAEEDLRTTLAELGKTRTVIIVTHSPVLLPICRDVVVLD 543

Query: 679 KGCIIADGPKHEVLNDL 695
           KGC+ A GP  E L  L
Sbjct: 544 KGCVAAAGPAAETLQRL 560