Pairwise Alignments

Query, 704 a.a., type I secretion system permease/ATPase from Vibrio cholerae E7946 ATCC 55056

Subject, 726 a.a., Type I secretion system ATPase, LssB family LapB from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score =  397 bits (1021), Expect = e-115
 Identities = 226/694 (32%), Positives = 390/694 (56%), Gaps = 16/694 (2%)

Query: 8   SLVYVSRYYGLANSPEALINGLPLADGKLTPFLFPRSAERAGLIAKENRAPLDQIPHLVF 67
           ++ YV+ +Y +A SP ++    P   GK       + A +AGL                 
Sbjct: 23  AISYVAGHYRVACSPGSIQANAPWLRGKSRTTALTQLARQAGLSFHAPDIDKTAFSQWRL 82

Query: 68  PVVLLLKGGEACVLNSINQETQEAEIVTAESGLVPVAYSLSDL--EAMYIG--RYFMVKK 123
           P+V+ L+ G+  V+  +N E      V  E G      +LS+L  E +Y+   R     K
Sbjct: 83  PLVVELRDGQLLVIEHVNGEEAVDVFVIEEEGQRN-RLTLSELLPEILYVAALRPLSALK 141

Query: 124 QFRFDERSPEVLKPRDGHWFWSTIYKSKHIYRDVLIASLLINLFAVAAPMFSRIVYDKVV 183
             R D R     KP    W    + +    Y  V++A+ LIN+ ++A  +FS  VYD+V+
Sbjct: 142 DSRVD-RYISRFKP---DWMRELVLQDIRPYLPVMVAAFLINVLSLAGIVFSMQVYDRVI 197

Query: 184 PNLAFETLWVLSSGILVIFLFDFVFKMLRSYFIDVAGKKSDILISSKLFSKVMGIRMEAR 243
           P  ++ TL+VLS G+LV  LF F+ +  R++ +DV GK++D+ IS ++F   + +R  A 
Sbjct: 198 PAQSYPTLYVLSFGVLVAVLFGFLLREARTHIMDVLGKRADMRISDRVFGHALRLRNSAI 257

Query: 244 PPSVGAFARHLQEFESIREFFTSATISSLIDLPFALLFLVLIWLMAGHLVWVPVIGVLIL 303
           P S G+F   L+E E IRE  TS+T+++++DLPF  LF++++ ++A  L W+  +  L++
Sbjct: 258 PRSTGSFISQLRELEQIREMITSSTLATIVDLPFFFLFMIVLAIIAPPLAWIAPVAALLM 317

Query: 304 VIYSFLIQSRLKRAIEEGSRLASQKYANLIESLAGLETVKLFGAQGQFQYRWEEAVAHMA 363
           ++    +Q +L     + +  A+ + A L+ES+ GLE +KL  A+ +F  +W   +    
Sbjct: 318 ILPGVALQKKLAVLANQAAHEATLRNAVLVESVQGLEDIKLMQAENRFLQQWNSYIRITG 377

Query: 364 NWNIKSRRITDSIQNTAGFVQQAANIGMIIVGVYLISNGDLTMGGLIAATMLSGRAIGPL 423
              +++R++T  + +    VQ      +I+ G  ++  G +T G ++AA+ML  R I P+
Sbjct: 378 ESGLRTRKLTQGLISWGMSVQSLVYAAVIMFGAPMVIEGSMTTGAVVAASMLGSRMIAPM 437

Query: 424 VQLSLLSTRYNQAKSSMTIIEQVMSMPDEQEEGKRYIHRPIIQGKIELDRVTFHYPNS-- 481
             L  +  R+ Q K++   ++ +M +P E +     IHR I+ G    +   F Y N   
Sbjct: 438 ANLCGVLARWQQVKAAKMGLDNIMQLPTETQHDDSLIHRDILHGHYLFENAQFRYHNDDQ 497

Query: 482 --PIASVRDLSLTIHPGEKVAIIGRIGSGKTTLERLIMGLYKPTEGHVRIDDTDISQLHH 539
             P+  VR   L I PGE++AI+GR G+GK+TL + + G  +  +G  R+D+  +S +  
Sbjct: 498 RIPLRLVR---LEIMPGERIAILGRNGAGKSTLLQAMAGGLEMIQGDARLDNLSLSHIDM 554

Query: 540 IDIRRNIGCVPQDSVLFYGSIRDNITLGRPLSDDREVMDAANRAGVTVFTQQDPAGLERQ 599
            D+RRNIG + Q++ LF+G++R+N+TLG P ++D ++ DA   +G  VF ++   GL+  
Sbjct: 555 ADLRRNIGFLSQNARLFFGTLRENLTLGAPHANDEQIFDALEVSGGAVFVRRLAKGLDHP 614

Query: 600 VGEGGMLLSGGQRQSVSIARAFLGRPPVLLMDEPTSAMDNRSEMHIKQQLSQLKPSETLI 659
           + EGG  LSGGQRQS+ +AR  L  P ++L+DEP++++D  +E    Q+L Q   + TL+
Sbjct: 615 IMEGGNGLSGGQRQSLLLARMLLRSPNIVLLDEPSASLDEHTEREFIQRLHQWLGNRTLV 674

Query: 660 LITHKTSMLDVVDRVIVMEKGCIIADGPKHEVLN 693
           + TH+  +L++V+RV+V+++G ++ D PK + LN
Sbjct: 675 VATHRVPILELVERVVVLKEGQLVMDAPKAQALN 708