Pairwise Alignments

Query, 704 a.a., type I secretion system permease/ATPase from Vibrio cholerae E7946 ATCC 55056

Subject, 726 a.a., type I secretion system ATPase, LssB family from Enterobacter asburiae PDN3

 Score =  417 bits (1073), Expect = e-121
 Identities = 233/702 (33%), Positives = 402/702 (57%), Gaps = 5/702 (0%)

Query: 6   LNSLVYVSRYYGLANSPEALINGLPLADGKLTPFLFPRSAERAGLIAKENRAPLDQIPHL 65
           L  ++ ++++Y L  S E +   +          +    A + GL  +   A    +   
Sbjct: 11  LQGMLIIAKHYRLDFSAEHVRVTINHESQSPRQLVLEEMARQLGLGMRMVAAESVSLDPW 70

Query: 66  VFPVVLLLKGGEACVLNSINQETQEAEIVTAESGLVPVAYSLSDLEAMYIGRYFMVKKQF 125
             P++    GG+  V+N ++ E   +   + + GL     +  +L A   G   +   + 
Sbjct: 71  RLPLLAEFTGGQIAVINRMDSEGNVSLQFSGDGGL-ETTLTRDELGARLKGLMVLRPLES 129

Query: 126 RFDERSPEVLKPRDGHWFWSTIYKSKHIYRDVLIASLLINLFAVAAPMFSRIVYDKVVPN 185
             D R  + +KP + +WFW    K    Y D+++ +L+ N+ A++  +FS  VYD+VVP+
Sbjct: 130 TPDARVDDYIKPYEKNWFWQLALKDWRRYSDIMLVALVANVLALSGMVFSMQVYDRVVPS 189

Query: 186 LAFETLWVLSSGILVIFLFDFVFKMLRSYFIDVAGKKSDILISSKLFSKVMGIRMEARPP 245
            +  TLWVL  G+++  +F+F+ +MLR +  DV GK++D+ IS ++F+  + I+  AR  
Sbjct: 190 QSEATLWVLFGGVMIAIVFEFIMRMLRVHISDVLGKRADLRISERVFAHALRIKNGARSK 249

Query: 246 SVGAFARHLQEFESIREFFTSATISSLIDLPFALLFLVLIWLMAGHLVWVPVIGVLILVI 305
           S G+F   ++E ES+RE  TS TI+++ DLPF LLF+ ++W++ G LV V ++ V +L+I
Sbjct: 250 STGSFIAQIRELESVRELITSTTIAAISDLPFFLLFVFILWMIGGPLVLVVLLAVPLLLI 309

Query: 306 YSFLIQSRLKRAIEEGSRLASQKYANLIESLAGLETVKLFGAQGQFQYRWEEAVAHMANW 365
              L+Q  L +   EG R ++ + A L+E++ G+E +KL  A+ +FQ +W       A+ 
Sbjct: 310 PGLLVQRPLGKLSSEGMRESAIRNATLVEAVQGIEDIKLMRAEQRFQNQWNNTNDVAASV 369

Query: 366 NIKSRRITDSIQNTAGFVQQAANIGMIIVGVYLISNGDLTMGGLIAATMLSGRAIGPLVQ 425
            +K R +T  +      VQ      +++VG YL+ +GD+T G L+  ++L+ R I PL Q
Sbjct: 370 GMKQRWLTGLLLTWTQEVQSIVYAVVLLVGCYLVISGDMTTGALVGTSILASRTIAPLSQ 429

Query: 426 LSLLSTRYNQAKSSMTIIEQVMSMP-DEQEEGKRYIHRPIIQGKIELDRVTFHYPNSPIA 484
           +S + +R+  AK +   ++ +M  P D+ + GK+ +H+  ++G   L+ V F+Y      
Sbjct: 430 ISGVLSRWQSAKVARKGLDDLMQRPIDDPQHGKK-VHKAHLRGDYALEDVGFYYDEEEKL 488

Query: 485 SVRDLS-LTIHPGEKVAIIGRIGSGKTTLERLIMGLYKPTEGHVRIDDTDISQLHHIDIR 543
           +V ++S L I  GE+VA++GR GSGK+TL +L+ G+ +P +G + +DD  ++ L   D+R
Sbjct: 489 TVLNISKLQIRAGERVAVLGRNGSGKSTLLQLLAGMQEPQQGSILLDDIALNHLDPADVR 548

Query: 544 RNIGCVPQDSVLFYGSIRDNITLGRPLSDDREVMDAANRAGVTVFTQQDPAGLERQVGEG 603
           R++  + Q + LF+GS+RDNI +G PL+ D E+  A   +G   F ++   GL   + EG
Sbjct: 549 RDMQLLSQQARLFFGSVRDNILMGNPLATDDEIHQALVNSGALEFVRKQKMGLNYIINEG 608

Query: 604 GMLLSGGQRQSVSIARAFLGRPPVLLMDEPTSAMDNRSEMHIKQQLSQ-LKPSETLILIT 662
           G  LSGGQRQ++ +ARA +  P +LL+DEPT+ +D  SE    Q L + L    TL++ T
Sbjct: 609 GAGLSGGQRQALLLARALITSPNILLLDEPTAWLDEMSEKQFIQHLHKWLGKRRTLVVAT 668

Query: 663 HKTSMLDVVDRVIVMEKGCIIADGPKHEVLNDLRQGNVRAVQ 704
           H+  +LD+VDR+IV+E G ++ DGP+  +L+       +A Q
Sbjct: 669 HRLPILDLVDRIIVLENGKVVMDGPRDAILHQHGMAPQKAAQ 710