Pairwise Alignments

Query, 704 a.a., type I secretion system permease/ATPase from Vibrio cholerae E7946 ATCC 55056

Subject, 720 a.a., type I secretion system permease/ATPase from Escherichia coli ECRC100

 Score =  427 bits (1098), Expect = e-124
 Identities = 229/699 (32%), Positives = 399/699 (57%), Gaps = 2/699 (0%)

Query: 6   LNSLVYVSRYYGLANSPEALINGLPLADGKLTPFLFPRSAERAGLIAKENRAPLDQIPHL 65
           L +++ V+RYY L  S E +   +          L    A + G+  +      D +   
Sbjct: 12  LEAMIAVARYYRLDFSQENVRATVNWERDSKREELLTDMARQLGMGLRLVEFSADSLNPW 71

Query: 66  VFPVVLLLKGGEACVLNSINQETQEAEIVTAESGLVPVAYSLSDLEAMYIGRYFMVKKQF 125
             P++ +    +  V+   +     +   + + GL     +++D+E   +    +     
Sbjct: 72  RLPLIAVFDNQQIGVITRRDNHDNISVQFSGDEGL-ETTLNVADIEDKIVELALLRPLSA 130

Query: 126 RFDERSPEVLKPRDGHWFWSTIYKSKHIYRDVLIASLLINLFAVAAPMFSRIVYDKVVPN 185
             D R  + ++P   +WFWS   K    Y D+++ASL+ N+ A+AA +FS  VYD+VVP 
Sbjct: 131 IPDARVDDYIRPYQANWFWSLSLKDWRRYGDIMLASLVANVLALAAMIFSMQVYDRVVPA 190

Query: 186 LAFETLWVLSSGILVIFLFDFVFKMLRSYFIDVAGKKSDILISSKLFSKVMGIRMEARPP 245
            ++ TLWVL +G+++  LF+F  +M+R++  DV GK++D+ IS ++F   + ++   R  
Sbjct: 191 QSYPTLWVLFAGVMMAILFEFCMRMVRTHLSDVIGKRADLRISDRVFGHALRLKNNVRSK 250

Query: 246 SVGAFARHLQEFESIREFFTSATISSLIDLPFALLFLVLIWLMAGHLVWVPVIGVLILVI 305
           S G+F   ++E ES+RE  TS TI ++ DLPF LLF+ ++W++ G LV V ++ + +LVI
Sbjct: 251 STGSFISQIRELESVRELITSTTIGAVADLPFFLLFVFILWMIGGWLVLVVLLALPLLVI 310

Query: 306 YSFLIQSRLKRAIEEGSRLASQKYANLIESLAGLETVKLFGAQGQFQYRWEEAVAHMANW 365
              L+Q  L R   EG R ++ + A L+E++  +E +KL  A+ +FQ +W       ++ 
Sbjct: 311 PGLLVQRPLARLANEGMRESAVRNATLVEAVQSIEDIKLLRAEQRFQNQWNHTNDVASSI 370

Query: 366 NIKSRRITDSIQNTAGFVQQAANIGMIIVGVYLISNGDLTMGGLIAATMLSGRAIGPLVQ 425
           ++K R +T  +      VQ    + +++VG +++ NGD+T G L+  T+L+ R I PL Q
Sbjct: 371 SMKQRFLTGLLLTWTQEVQSIVYVVVLLVGCFMVMNGDMTTGALVGTTILASRTIAPLSQ 430

Query: 426 LSLLSTRYNQAKSSMTIIEQVMSMPDEQEEGKRYIHRPIIQGKIELDRVTFHY-PNSPIA 484
           +S + +R+ QAK +   ++++M  P +Q E  + +H+ ++ G  +     F+Y     IA
Sbjct: 431 ISGVLSRWQQAKVARNGLDELMKRPVDQPEHGKLVHKAVLHGNYQFSNAVFYYDEEEKIA 490

Query: 485 SVRDLSLTIHPGEKVAIIGRIGSGKTTLERLIMGLYKPTEGHVRIDDTDISQLHHIDIRR 544
            V    L I  GEK+AI+GR G+GK+TL +++ G+    +G V +D+  I QL   D+RR
Sbjct: 491 DVAIGKLNIQAGEKIAILGRNGAGKSTLLQMLAGMRIAQQGQVLLDNISIGQLDPADLRR 550

Query: 545 NIGCVPQDSVLFYGSIRDNITLGRPLSDDREVMDAANRAGVTVFTQQDPAGLERQVGEGG 604
           ++G + Q   LF+GS+R+N+T+G P + D ++  A   +G   F Q+   GL   + EGG
Sbjct: 551 DMGLLSQTGRLFFGSLRENLTMGMPEASDEDIERALTLSGALPFVQKQKNGLNYMIQEGG 610

Query: 605 MLLSGGQRQSVSIARAFLGRPPVLLMDEPTSAMDNRSEMHIKQQLSQLKPSETLILITHK 664
             LSGGQRQ++ +AR  + +P ++L+DEP++++D  +E ++ +QL Q     TLI+ TH+
Sbjct: 611 FGLSGGQRQTLLLARLLISQPNIVLLDEPSASLDEMAEAYLIEQLKQWIGHRTLIIATHR 670

Query: 665 TSMLDVVDRVIVMEKGCIIADGPKHEVLNDLRQGNVRAV 703
           T+ML +VDR+IVM++G I+ DG K  +L +  +   R V
Sbjct: 671 TAMLQLVDRIIVMDQGRIVMDGAKEAILREQGEPTARRV 709