Pairwise Alignments

Query, 704 a.a., type I secretion system permease/ATPase from Vibrio cholerae E7946 ATCC 55056

Subject, 592 a.a., ABC-type bacteriocin/lantibiotic exporters, contain an N-terminal double-glycine peptidase domain from Echinicola vietnamensis KMM 6221, DSM 17526

 Score =  238 bits (608), Expect = 5e-67
 Identities = 161/560 (28%), Positives = 283/560 (50%), Gaps = 6/560 (1%)

Query: 140 GHWFWSTIYKSKHIYRDVLIASLLINLFAVAAPMFSRIVYDKVVPNLAFETLWVLSSGIL 199
           GH F + I+  +      L   ++  L  +  P  S+ + D+V+PN   + L  L   + 
Sbjct: 23  GHVFKTIIWPRRKQLFIGLFLIIISRLAGLVLPGASKYLMDEVIPNSNMQLLKWLVIAVG 82

Query: 200 VIFLFDFVFKMLRSYFIDVAGKKSDILISSKLFSKV--MGIRMEARPPSVGAFARHLQEF 257
           V      V     +  + V  +     + +K+ S +  + IR      +    +R + + 
Sbjct: 83  VAVTVQAVTSFALTQILSVEAQHLIAKLRAKVQSHIIKLPIRFFDNAKTGELVSRIMTDV 142

Query: 258 ESIREFFTSATISSLIDLPFALLFLVLIWLMAGHLVWVPVIGVLILVIYSFLIQSRLKRA 317
           E +R    +     +  +  +++ L L+  ++  +    ++ V+I  + S     +++  
Sbjct: 143 EGVRNLVGTGLAQMVGGVLTSVICLGLLIYISPMMTLYVLVPVIIFGLISLKAFGKIRPI 202

Query: 318 IEEGSRLASQKYANLIESLAGLETVKLFGAQGQFQYRWEEAVAHMANWNIKSRRITDS-I 376
             E  ++ ++    L E+L G+  +K F A+ Q    +EE V  +   NIKS   T S +
Sbjct: 203 FRERGKINAEVTGRLAETLGGIRVIKGFNAEAQEVKTFEEGVLRLY-LNIKSSLTTTSMV 261

Query: 377 QNTAGFVQQAANIGMIIVGVYLISNGDLTMGGLIAATMLSGRAIGPLVQLSLLSTRYNQA 436
            + A  +   A+ G++ +G Y+I +G+LT G  +A T+  G  I P+VQ+S + ++  +A
Sbjct: 262 TSAATLLLGLASAGIMGIGGYMIMSGELTFGDFLAFTLYLGFMIAPIVQMSNIGSQLTEA 321

Query: 437 KSSMTIIEQVMSMPDEQEEGKRYIHRPIIQGKIELDRVTFHYPNSPIASVRDLSLTIHPG 496
            + +   E++M++P E++E  R +  P I+G +  ++V+F Y       V+++S     G
Sbjct: 322 FAGLDRTEEIMNIPLEEDEKSRNLQLPSIKGDLAFEQVSFAYEEGKNV-VKEVSFEAPAG 380

Query: 497 EKVAIIGRIGSGKTTLERLIMGLYKPTEGHVRIDDTDISQLHHIDIRRNIGCVPQDSVLF 556
              A++G  GSGKTT+  L+     P  G V ID TD+ Q+     R  +G V QD  LF
Sbjct: 381 SMTALVGTSGSGKTTIAGLVASFLNPAGGTVTIDGTDLQQVSLASYRSQLGVVLQDDFLF 440

Query: 557 YGSIRDNITLGRPLSDDREVMDAANRAGVTVFTQQDPAGLERQVGEGGMLLSGGQRQSVS 616
            G+IR NI   RP +   ++M A   A V  FT +   GL+  +GE G+ LSGGQ+Q ++
Sbjct: 441 EGTIRQNILFPRPDARTEQLMQAVYAAHVHEFTDRFEDGLDTLIGERGVKLSGGQKQRIA 500

Query: 617 IARAFLGRPPVLLMDEPTSAMDNRSEMHIKQQLSQLKPSETLILITHKTSMLDVVDRVIV 676
           IARA L  P +L++DE TS +D  SE  I++ L +L    T  +I H+ S +   D+++V
Sbjct: 501 IARAILADPRILILDEATSNLDTESETLIQESLKKLMKGRTSFVIAHRLSTIRQADQILV 560

Query: 677 MEKGCIIADGPKHEVLNDLR 696
           +EKG I+  G +HE L + R
Sbjct: 561 VEKGEIVERG-QHEELMEKR 579