Pairwise Alignments

Query, 704 a.a., type I secretion system permease/ATPase from Vibrio cholerae E7946 ATCC 55056

Subject, 595 a.a., ABC-type multidrug transport system, ATPase and permease components from Echinicola vietnamensis KMM 6221, DSM 17526

 Score =  208 bits (530), Expect = 5e-58
 Identities = 155/550 (28%), Positives = 278/550 (50%), Gaps = 28/550 (5%)

Query: 154 YRDVLIASLLINLFAVAAPMFSRIVYDKVVPNLAFETLWVLSSG-----ILVIFLF-DFV 207
           Y+ + I  L+  LF+    +    V  K++ ++A    W+ S+      +L+  LF   V
Sbjct: 34  YKGIFIVGLIFLLFSSLTLLAFPYVAGKLI-DVAQGKKWMFSNINTIALVLIGILFVQSV 92

Query: 208 FKMLRSYFIDVAGKKSDILISSKLFSKVMGIRMEARPPS-VGAFARHLQEFESIREFFTS 266
           F   R +   +  ++S   I   L+S+++ + M        G     +    S+ +   S
Sbjct: 93  FSFFRVWLFALVSERSMRDIRLSLYSRLVNLPMSFFDKRRTGELISRITSDVSLLQDTFS 152

Query: 267 ATISSLIDLPFALL------FLVLIWLMAGHLVWVPVIGVLILVIYSFLIQSRLKRAIEE 320
            T++ L      LL      F+    L    L   PV+ ++ +V   F+     K + E 
Sbjct: 153 VTLAELFRQIITLLAGTVFLFVTTPRLTLFMLATFPVLVIIAMVFGKFI----RKLSKET 208

Query: 321 GSRLASQKYANLI--ESLAGLETVKLFGAQGQFQYRWEEAVAHMANWNIKSRRITDSIQN 378
              LA+   AN+I  E+L  + TVK F  +     R+ + +  +    +K+     +  +
Sbjct: 209 QDELAA---ANVIVEETLQSISTVKSFAGEAYEAARYGKGLNKVVKVALKAAGFRGAFIS 265

Query: 379 TAGFVQQAANIGMIIVGVYLISNGDLTMGGLIAATMLSGRAIGPLVQLSLLSTRYNQAKS 438
              F      + ++  G  ++S G +++G L++  + +    G +  L  +   Y Q + 
Sbjct: 266 FIIFALFGGIVAVMWYGAMMVSTGAMSIGDLVSFVLYTTFIGGSIAGLGDI---YGQVQK 322

Query: 439 SMTIIEQVMSMPDEQEEGKRYIHRPI-IQGKIELDRVTFHYPNSPIASV-RDLSLTIHPG 496
           ++   E+V+ + DE  E     ++ + I+G +    V+F+YP  P A V + ++++I  G
Sbjct: 323 AIGSSERVLEILDESPEESLADYQEVSIKGNVSFSDVSFNYPTRPEADVLKHINISIQSG 382

Query: 497 EKVAIIGRIGSGKTTLERLIMGLYKPTEGHVRIDDTDISQLHHIDIRRNIGCVPQDSVLF 556
           EK+A+ G  G+GK+T+ +L+M  Y    G + IDD  I   +   +R NIG VPQ+ +LF
Sbjct: 383 EKIALAGHSGAGKSTIIQLLMKFYTINFGEITIDDKPIQNWNLKQLRSNIGIVPQEVLLF 442

Query: 557 YGSIRDNITLGRPLSDDREVMDAANRAGVTVFTQQDPAGLERQVGEGGMLLSGGQRQSVS 616
            GSIR+NI   +P + ++E+++AA +A    F  + P GL+  VGE G+ LSGGQRQ ++
Sbjct: 443 GGSIRENIAYAKPEATEQEIIEAAKKANAWQFIGKFPEGLDTLVGERGIKLSGGQRQRIA 502

Query: 617 IARAFLGRPPVLLMDEPTSAMDNRSEMHIKQQLSQLKPSETLILITHKTSMLDVVDRVIV 676
           IARA L  P +L++DE TS++D  SE  +++ L +L  + T I+I H+ + +  VDR+ V
Sbjct: 503 IARAILKNPSILILDEATSSLDAESEALVQEALDELMKNRTTIVIAHRLATIRKVDRIYV 562

Query: 677 MEKGCIIADG 686
           M+ G I+ +G
Sbjct: 563 MKDGEIVEEG 572