Pairwise Alignments

Query, 704 a.a., type I secretion system permease/ATPase from Vibrio cholerae E7946 ATCC 55056

Subject, 577 a.a., ABC transporter, nucleotide binding/ATPase protein from Agrobacterium fabrum C58

 Score =  187 bits (475), Expect = 1e-51
 Identities = 139/548 (25%), Positives = 252/548 (45%), Gaps = 13/548 (2%)

Query: 154 YRDVLI----ASLLINLFAVAAPMFSRIVYDKVVPNLAFETLWVLSSGILVIFLFDFVFK 209
           YR + I     ++L  +  +  PM  +   D ++P   +  +   S G+LVI++ +    
Sbjct: 12  YRGLFILDFSCAVLSGVLELGFPMAVKAFVDVLLPGGQWGIILAASVGLLVIYVLNTGLM 71

Query: 210 MLRSYFIDVAGKKSDILISSKLFSKVMGIRM-----EARPPSVGAFARHLQEFESIREFF 264
              +Y+  + G   +  +    F  +  +       +     VG   + L+E   +    
Sbjct: 72  ATVTYWGHMLGINIETDMRRLAFDHLQKLSFRYFDNQKTGHLVGRLTKDLEEIGEVAHHG 131

Query: 265 TSATISSLIDLPFALLFLVLIWLMAGHLVWVPVIGVLILVIYSFLIQSRLKRAIEEGSRL 324
                 +++    A L ++ + +    LV   V+ V   V   +    R+ +        
Sbjct: 132 PEDLFIAIMTFIGAFLLMMSVNVQLA-LVTAAVVPVTAWVTSRY--GGRMTQNFRALYGR 188

Query: 325 ASQKYANLIESLAGLETVKLFGAQGQFQYRWEEAVAHMANWNIKSRRITDSIQNTAGFVQ 384
                A + E++ G+  V+ F  +   +  +E+         + + +I  +  + +    
Sbjct: 189 VGDFNARIEENVGGMRVVQAFANEDHERSLFEKDNQKYRRTKLDAYKIMAASTSLSYMSM 248

Query: 385 QAANIGMIIVGVYLISNGDLTMGGLIAATMLSGRAIGPLVQLSLLSTRYNQAKSSMTIIE 444
           +   + ++I G + + NG LT GG +   +L G    P+ +++ +   Y +  +      
Sbjct: 249 RLTQMIVMICGAWFVLNGSLTEGGFVGFLLLVGVFFRPVEKINSVIETYPKGIAGFRRFT 308

Query: 445 QVMSMPDEQEEGKRYIHRPIIQGKIELDRVTFHYPNSPIASVRDLSLTIHPGEKVAIIGR 504
           +++    +  +    I  P + G IE   V F Y       + ++ L I  GE VA +G 
Sbjct: 309 ELLDTAPDIVDAPDAIDAPALSGAIEYRHVGFGYAEGKRV-LDNIDLKISAGETVAFVGP 367

Query: 505 IGSGKTTLERLIMGLYKPTEGHVRIDDTDISQLHHIDIRRNIGCVPQDSVLFYGSIRDNI 564
            G+GKTTL  L+   Y  T G + ID  DI ++    +R  IG V QD  LF G+IR+NI
Sbjct: 368 SGAGKTTLCSLLPRFYDVTSGSITIDGIDIRKMKLASLRNQIGIVQQDVFLFGGTIRENI 427

Query: 565 TLGRPLSDDREVMDAANRAGVTVFTQQDPAGLERQVGEGGMLLSGGQRQSVSIARAFLGR 624
             GR  + D E+MDAA RA +    +  P GL+  +GE G+ LSGGQ+Q ++IAR FL  
Sbjct: 428 EYGRLGASDEEIMDAARRARLDGVIEAMPLGLDTVIGERGVKLSGGQKQRLAIARMFLKN 487

Query: 625 PPVLLMDEPTSAMDNRSEMHIKQQLSQLKPSETLILITHKTSMLDVVDRVIVMEKGCIIA 684
           PP+L++DE TSA+D  +E  I+Q L++L    T ++I H+ + +    R++V+++  I  
Sbjct: 488 PPILILDEATSALDTETERAIQQSLTELAKGRTTLVIAHRLATIRDASRIVVVDQTGIAE 547

Query: 685 DGPKHEVL 692
            G   E+L
Sbjct: 548 TGAHAELL 555