Pairwise Alignments

Query, 636 a.a., GGDEF domain-containing protein from Vibrio cholerae E7946 ATCC 55056

Subject, 1247 a.a., diguanylate cyclase from Pseudomonas simiae WCS417

 Score =  101 bits (251), Expect = 2e-25
 Identities = 98/418 (23%), Positives = 181/418 (43%), Gaps = 18/418 (4%)

Query: 232  QLRERAYLDPVSHLGNRAYYMSQLSGWLS---ESGI-GGVAILQAEFIKELYEEKGYEAG 287
            +L  +A+ DP++ L NR  + S+L   L+   E+G  G V  L  +  K + +  G+  G
Sbjct: 802  RLDYQAHHDPLTGLPNRTLFESRLQAALNGHQETGQQGAVLFLDLDRFKHINDSLGHPIG 861

Query: 288  DGMVRELADRLKNSITIKDISIARISTYEFGIIMPNMDE-TELKIVAESIITCVDDINPD 346
            D +++++A RLK  +   D ++AR+   EF I++P +   ++ + +A  ++ C     P 
Sbjct: 862  DLLLKDIAVRLKEQLRDID-TVARLGGDEFIILLPGLQHASDAQYLANKLLACFTP--PF 918

Query: 347  PTGMAKANLSLGVVSNKRQSSTTTLLSLLDNALAKAKSNPELNYGFISSDTDKIILGKQQ 406
              G  +  +S  + ++      T + +L+ NA A    +       + S T  +     +
Sbjct: 919  QAGEHEFFISASIGTSLYPEDGTDVATLVKNADAAMYRSKAKGRNRVESYTRDLTAQANE 978

Query: 407  WKTLVEE---AIHNDWFTFRYQAANS-SWGKTFHREVFSAFEKDGVRYTANQFLFALEQL 462
               L  E   AI  D  +  YQ   S +  +    E    +          +   AL + 
Sbjct: 979  RVALEHELRRAIERDELSLYYQPKLSLATHELIGAEALIRWHHPTFGDVPPEHFIALAEE 1038

Query: 463  NASHI-FDQYVIERVIQQLE--KGELTD--PLAINIAQGSISQPSFIRWISQTLSKHLSV 517
            N   +    +V+E+  +Q+   +G   D  PL++N+A   +  P  +  I Q L  +   
Sbjct: 1039 NGMILQIGDWVLEQACRQMHAWQGHFDDFGPLSVNLAGAQLRHPGLLGRIKQLLHDYQLD 1098

Query: 518  ANLLHFEIPEGCFVNEPHYTALFCNAVRNAGADFGVDNYGRNFQSLDYINEFRPKYVKLD 577
               L  EI E   +++        + +++ G    +D++G  + SL Y+      ++K+D
Sbjct: 1099 PGRLQLEITENFIMSQAEEALDVLHQLKDLGVQLAIDDFGTGYSSLSYLKRLPLDFLKID 1158

Query: 578  YLFTHHL-DDERQKFTLTSISRTAHNLGITTIASRVETQTQLDFLSEHFIEVFQGFIV 634
              F   L DD      + +I    H++  T IA  VE   Q  FL+    E  QG+IV
Sbjct: 1159 QSFVRGLPDDPHDAAIVRAIIALGHSMQFTIIAEGVENPAQQAFLAAEGCEQMQGYIV 1216