Pairwise Alignments

Query, 636 a.a., GGDEF domain-containing protein from Vibrio cholerae E7946 ATCC 55056

Subject, 1283 a.a., diguanylate phosphodiesterase from Pseudomonas simiae WCS417

 Score =  108 bits (269), Expect = 2e-27
 Identities = 102/422 (24%), Positives = 186/422 (44%), Gaps = 22/422 (5%)

Query: 231  QQLRERAYLDPVSHLGNRAYYMSQLSGWLS----ESGIGGVAILQAEFIKELYEEKGYEA 286
            Q++   AY D ++HL NR  +  +L   L     +     +  L  +  K + +  G+ A
Sbjct: 842  QRIHRLAYYDALTHLPNRTLFQDRLHTALQAAERQKSWVVLMFLDLDRFKPINDSLGHAA 901

Query: 287  GDGMVRELADRLKNSITIKDISIARISTYEFGIIMPNMDETELKI-----VAESIITCVD 341
            GD M++E+A RL   +  +D ++AR+   EF +++      E+ +     VAE I+  + 
Sbjct: 902  GDRMLKEMATRLLGCVA-EDDTVARMGGDEFTLLLQPRVNREMALNRAIHVAEQILASL- 959

Query: 342  DINPDPTGMAK--ANLSLGV-VSNKRQSSTTTLLSLLDNALAKAKSNPELNYGFISSDTD 398
             + P      +     S+G+ +S +  +  + L+   D A+  AK   + N+ F  +D +
Sbjct: 960  -VKPFVLEGREFFVTASIGIALSPQDGNELSQLMKNADTAMYHAKERGKNNFQFYQADMN 1018

Query: 399  KIILGKQQWKTLVEEAIHNDWFTFRYQAANSSWGK--TFHREVFSAFEKDGVRYTANQFL 456
               L + + ++ +  A+  + F   YQ   S  GK  T    +               F+
Sbjct: 1019 ASALERLELESDLRHALEQNEFVLYYQPQFSGDGKRLTGAEALLRWRHPRRGLVPPGDFI 1078

Query: 457  FALEQLNASHIFDQYVIERVIQQLE---KGELTDP-LAINIAQGSISQPSFIRWISQTLS 512
              LE+L        +VI    +QL+   + ++  P +++NI+    S       I+  L 
Sbjct: 1079 PVLEELGLVVDVGDWVISEACRQLKTWHQNKVRVPKVSVNISARQFSDGQLGTRIATILK 1138

Query: 513  KHLSVANLLHFEIPEGCFVNEPHYTALFCNAVRNAGADFGVDNYGRNFQSLDYINEFRPK 572
                    L  E+ E   + E +      ++++N G    VD++G  + SL+Y+ +F   
Sbjct: 1139 DTGLPPACLELELTESILMREVNEAMQILDSLKNLGLSIAVDDFGTGYSSLNYLKQFPID 1198

Query: 573  YVKLDYLFTHHLDDERQKFTLT-SISRTAHNLGITTIASRVETQTQLDFLSEHFIEVFQG 631
             +K+D  F   L    Q   +  +I   AH+L +  IA  VET  QLDFL EH  +  QG
Sbjct: 1199 VLKIDRTFVDGLPSGEQDAQIARAIIAMAHSLNLAVIAEGVETHEQLDFLREHGCDEVQG 1258

Query: 632  FI 633
            ++
Sbjct: 1259 YL 1260