Pairwise Alignments

Query, 636 a.a., GGDEF domain-containing protein from Vibrio cholerae E7946 ATCC 55056

Subject, 648 a.a., GGDEF domain protein from Pseudomonas putida KT2440

 Score =  209 bits (532), Expect = 3e-58
 Identities = 165/652 (25%), Positives = 306/652 (46%), Gaps = 29/652 (4%)

Query: 1   MTLYKQLVAGMIAVFILLLISVFTIEFNTTRNSLEQQQRSEVNNTINTVGLALAPYLEKK 60
           M+L+KQL+  +    ++     F +   ++R+    Q RS   +    + L+L P ++  
Sbjct: 1   MSLFKQLLLAICLFLVVAFSGSFMVSLESSRSQYVNQLRSHAQDAATALALSLTPNID-- 58

Query: 61  DTIAVESVINALFDGSSYSIVRLIFLDDGTEIL-RSYPIQPNNVPAWFTQLNLFEPIHDR 119
           D   VE +++++FD   Y+ ++++ L     ++ R     P  VP WF +L   E     
Sbjct: 59  DPAMVELMVSSIFDSGYYASIKVVDLGSNAVLVERHAEPDPGGVPLWFVRLIGLEAAGGD 118

Query: 120 RVVTSGWMQLAEVEIVSHPGAAYAQLWKALIR----LSIAFLAILVIGMFAVAFILKRSL 175
            +V+ GW Q A VE++SHP  A A+LW++ +     L +   A  V+G    A +L+R L
Sbjct: 119 AIVSRGWQQAARVEVISHPMFAIAKLWQSALGSLGWLLLCGAASAVLG----ALLLRRQL 174

Query: 176 RPLQLIVNKMEQVANNQFGEPLPRPNTRDLIYVVDGINKMSEQVEKAFKAQAKEAQQLRE 235
           RPL  +V +   +A  +F      P T +L  VV  +N+M E+++  F  QA+ +++LR 
Sbjct: 175 RPLDYMVEQSHAIARREFLSLPELPRTPELRRVVQAMNQMVEKLKALFTEQAERSERLRA 234

Query: 236 RAYLDPVSHLGNRAYYMSQLSGWLS---ESGIGGVAILQAEFIKELYEEKGYEAGDGMVR 292
            +Y D ++ L NR Y+  QL+  +S   ++  G + +L+ + +  L    G +  D +++
Sbjct: 235 ESYQDSLTGLSNRRYFEMQLNNRVSNLEDARAGYLLLLRVQGLAGLNARLGGQRTDQLLQ 294

Query: 293 ELADRLKN---SITIKDISIARISTYEFGIIMPNMDETELKIVAESIITCVDDINPDPTG 349
            + ++L+    S    +  I+R    EF ++ P M   E   +A+++   +  ++     
Sbjct: 295 AVGEQLRRTCASYPETNDLISRSRGGEFAVLAPGMVHEEAVHLAQALEATLQSLHETGAS 354

Query: 350 MAKANLSLGVVSNKRQSSTTTLLSLLDNALAKAKSNPELNYGFISSDTDKIILGKQQ-WK 408
                  +G+       S   LL L D ALA+A++ P   +  +      +    Q  W 
Sbjct: 355 DIDPVACIGLAPFSPGDSPQALLKLADEALARAENQPTPGWVCLEQGVAAVAADSQHAWH 414

Query: 409 TLVEEAIHNDWFTFRYQAA--NSSWGKTFHREVFSAF-EKDGVRYTANQFLFALEQLNAS 465
             +++A  N  F   +Q     +S  +  H +V S   +  G    A +FL  LE+    
Sbjct: 415 ERLDQAFINGHFELFFQPVIECASSQRVLHHKVISRLRDGQGEALPAGRFLPWLERFGWM 474

Query: 466 HIFDQYVIERVIQQLEKGELTDPLAINIAQGSISQPSFIRWISQTLSKHLSVANLLHFEI 525
              D  V+E+V+  L   +    LA+N++  +++ P  ++ + + L ++ ++   L FEI
Sbjct: 475 PRLDVLVLEKVLAHLRGHD--QVLALNLSAATLADPKALQRVFELLGQNAALGPRLVFEI 532

Query: 526 PEGCFVNEPHYTALFCNAVRNAGADFG--VDNYGRNFQSLDYINEFRPKYVKLDYLFTHH 583
            E      P   AL     R  G  FG  +  +G  F  +  +      Y+K+D  +  +
Sbjct: 533 GE---EQLPEQAALEQLTRRLHGLGFGLALQRFGGRFSMIGNLAHLGLAYLKIDGSYIRN 589

Query: 584 LDDERQK-FTLTSISRTAHNLGITTIASRVETQTQLDFLSEHFIEVFQGFIV 634
           +D E+ K   + +I R AH++ +  IA RVET+ +   L E  +   QG +V
Sbjct: 590 IDHEQHKRLFIEAIQRAAHSIDLPLIAERVETEGERLVLLEMGVGGIQGQLV 641