Pairwise Alignments

Query, 636 a.a., GGDEF domain-containing protein from Vibrio cholerae E7946 ATCC 55056

Subject, 684 a.a., GGDEF domain-containing protein from Magnetospirillum magneticum AMB-1

 Score =  100 bits (250), Expect = 2e-25
 Identities = 115/528 (21%), Positives = 232/528 (43%), Gaps = 34/528 (6%)

Query: 125 GWMQLAEVEIVSHPGAAYAQLWK----ALIRLSIAFLAILVIGMFAVAFILKRSLRPLQL 180
           G   +  +E+  H G   ++L +    A I LS AFL +  + + AV  ++     PL  
Sbjct: 129 GEYPVGRLEVAFHDGKVRSELVRQRAGAAIVLSGAFLLVTAVLLAAVRHLVTG---PLTR 185

Query: 181 IVNKMEQVANNQFGEPLPRPNTRDLIYVVDGINKMSEQVEKAFKAQAKEAQQLRERAYLD 240
           + N +   A+    EPL   +  +L  VV   N++  ++++    + ++  QL  R   D
Sbjct: 186 LRNSLHHNASVLMREPLVWSSRDELGEVVHAYNQLLTEIDQ----RTEDIHQLANR---D 238

Query: 241 PVSHLGNRAYYMSQLSGWLSESGIGG--VAILQAEF--IKELYEEKGYEAGDGMVRELAD 296
            ++ L NR     ++   ++ +G     +A+L A+    K + +  G++ GD ++R +AD
Sbjct: 239 LLTGLPNRRLLEDRIGHAIALAGRQNRSIALLFADIDNFKVVNDTLGHKQGDALLRIIAD 298

Query: 297 RLKNSITIKDISIARISTYEFGIIMPNMDET-ELKIVAESIITCVDDINPDPTGMAKANL 355
           R+ + +   D ++AR    EF I++ +++   E   VAE +I  +       + + +  +
Sbjct: 299 RIHDIMRGMD-TVARWGGDEFVIVVESLNSAGEAASVAEKLIETIGVPVQLGSNLLRVGV 357

Query: 356 SLGVVSNKRQSST-TTLLSLLDNALAKAKSNPELNYGFISSDTDKIILGKQQWKTLVEEA 414
           S+G+    +  +  TTL+   D AL +AK      + F     +   L +   +  + +A
Sbjct: 358 SVGISMYPQDGADITTLIKNADMALFEAKGRGRNTFHFFDQAMNARALRRMDIEMALRQA 417

Query: 415 IHNDWFTFRYQAA-NSSWGKTFHREVFSAFEKDGVRYTA-NQFLFALEQLNASHIFDQYV 472
           I  +     YQ    S+ G     E    + + G      ++F+   E+ +      ++V
Sbjct: 418 IPQNQLELHYQPKIASASGALAGVEALVRWRRPGEGLVQPDEFIPLAEESDLIVAVGEWV 477

Query: 473 IERVIQQLEKGELTD----PLAINIAQGSISQPSFIRWISQTLSKHLSVANLLHFEIPEG 528
           +    +Q+   E        +A+N++         +  I + + +     +L+  E+ E 
Sbjct: 478 LNEACRQIRDWEARGFGEVAVAVNLSPRHFLHEKDVDGIFRIVDQSGVRPDLIEVEVTES 537

Query: 529 CFVNEPHYTALFCNAVRNAGADFGVDNYGRNFQSLDYINEFRPKYVKLDYLFT----HHL 584
            F++EP     + N +R+ G    +D++G  + SL Y+       +K+D  F     H+ 
Sbjct: 538 TFMHEPEKVIGYLNRLRDRGFGIAIDDFGSGYSSLSYLRRLPITTLKIDRAFVMDIEHNA 597

Query: 585 DDERQKFTLTSISRTAHNLGITTIASRVETQTQLDFLSEHFIEVFQGF 632
           D+      + +I   A+ +G+  IA  VE + Q +FL      V QG+
Sbjct: 598 DNAE---IIRAIIAMANAMGLGLIAEGVENRHQFEFLRHADCGVVQGY 642