Pairwise Alignments

Query, 636 a.a., GGDEF domain-containing protein from Vibrio cholerae E7946 ATCC 55056

Subject, 831 a.a., PAS domain S-box protein from Magnetospirillum magneticum AMB-1

 Score = 89.4 bits (220), Expect = 6e-22
 Identities = 98/426 (23%), Positives = 181/426 (42%), Gaps = 25/426 (5%)

Query: 226 QAKE-AQQLRERAYLDPVSHLGNRAYYMSQLSGWLSESGIGGVAI----LQAEFIKELYE 280
           +A+E A+QL +R+  DP++ L NR  ++ +L   L  +G  G  +    +  +  K + +
Sbjct: 145 EARETAEQLWQRSNFDPLTELPNRNLFLDRLLQALVLAGREGSKVAMLFIGLDGFKNIND 204

Query: 281 EKGYEAGDGMVRELADRLKNSITIKDISIARISTYEFGIIMPNMDET-ELKIVAESIITC 339
             G+  GD +++E A R +N +   D + AR    EF +++  +  T E++ V  S++  
Sbjct: 205 SLGHWIGDKVLQEAARRFQNCLRQGDTA-ARFGGDEFTVVLSGVRATAEVEAVIRSVLEV 263

Query: 340 VDDINPDPTGMAKANLSLGVVSNKRQSSTT-TLLSLLDNALAKAKSNPELNYGFISSDTD 398
           + +           + S+GV           +L+     AL +AK      + F +   D
Sbjct: 264 LQEPFVVEHHHILISCSIGVCMWPGDGEDVDSLMRNATAALQQAKQAGRNTFRFFTPAMD 323

Query: 399 KIILGKQQWKTLVEEAIHNDWFTFRYQA-ANSSWGKTFHREVFSAFEKDGVRY----TAN 453
                + +    +  A+    F   +Q   +   GK    E    +     RY    + +
Sbjct: 324 ARAQARSRLADELSGALSQGEFHLVFQPLVDVKSGKVNAAEALLRWHN---RYLGVVSPD 380

Query: 454 QFLFALEQLNASHIFDQYVIER------VIQQLEKGELTDPLAINIAQGSISQPSFIRWI 507
           QF+   E++       ++++        V Q +  GE+   +A+NI+     Q   +  I
Sbjct: 381 QFVPLAEEIGLIRPIGEWLLTAACREALVWQGMGLGEIN--IAVNISPRQFQQGDIVGII 438

Query: 508 SQTLSKHLSVANLLHFEIPEGCFVNEPHYTALFCNAVRNAGADFGVDNYGRNFQSLDYIN 567
            + L        LL  EI EG  ++          A+R  G    VD++G  + SL Y+ 
Sbjct: 439 RRALEDTRLPPWLLTIEITEGLLLSNGEEILAKMEAIRTLGVSLSVDDFGTGYSSLSYLK 498

Query: 568 EFRPKYVKLDYLFTHHLDDERQKFTLT-SISRTAHNLGITTIASRVETQTQLDFLSEHFI 626
            F    +K+D  F   + D     T+  +I    H+L +  +A  VET+ QLDF++    
Sbjct: 499 SFPVDVLKIDRSFIADMGDHSDDATMVEAIIALGHSLHLEVVAEGVETKQQLDFITAQGC 558

Query: 627 EVFQGF 632
           +V QG+
Sbjct: 559 DVAQGY 564