Pairwise Alignments

Query, 636 a.a., GGDEF domain-containing protein from Vibrio cholerae E7946 ATCC 55056

Subject, 645 a.a., Cyclic di-GMP phosphodiesterase Gmr from Alteromonas macleodii MIT1002

 Score =  219 bits (557), Expect = 4e-61
 Identities = 158/647 (24%), Positives = 299/647 (46%), Gaps = 19/647 (2%)

Query: 1   MTLYKQLVAGMIAVFILLLISVFTIEFNTTRNSLEQQQRSEVNNTINTVGLALAPYL-EK 59
           M L  QL   +    +L+    F I    TR  + +Q  +   +T  ++GL++ PY+ E 
Sbjct: 1   MRLSTQLSTSLAIFLVLVFAGSFIINVKLTREYVNEQLATHAQDTATSLGLSITPYIGEP 60

Query: 60  KDTIAVESVINALFDGSSYSIVRLIFLDDGTEILRSYPIQPNNVPAWFTQLNLFEPIHDR 119
              I  E+++NA+FD   Y  + +  ++    I R  P   ++VPAWFT L    P   R
Sbjct: 61  NGIIVAETMVNAIFDRGFYQYITVSDMEGNLLIERKNPNTQDSVPAWFTNLVEVTPPVQR 120

Query: 120 RVVTSGWMQLAEVEIVSHPGAAYAQLWKALIRLSIAFLAILVIGMFAVAFILKRSLRPLQ 179
             +  GW    E+ + SHPG A   L++++ + +  F A  V+   A+ FI+    +PL+
Sbjct: 121 TELNDGWTLAGELTVQSHPGLANETLYESVKQSAFMFFAAFVVAYIALLFIITAITKPLR 180

Query: 180 LIVNKMEQVANNQFGEPLPRPNTRDLIYVVDGINKMSEQVEKAFKAQAKEAQQLRERAYL 239
           ++V+K+  + N +F +   +P T++L ++   +NK+S  VE  FK  +++A+  + +AY 
Sbjct: 181 IVVHKINDIQNQKFSQINYKPFTQELTFITQAVNKLSSSVEGMFKELSQKAEHFKAQAYE 240

Query: 240 DPVSHLGNRAYYMSQLSGWLS---ESGIGGVAILQAEFIKELYEEKGYEAGDGMVRELAD 296
           D ++ + NR+ +   ++  LS    S  G + I++   +  +    G + GD  V  +A+
Sbjct: 241 DSLTGVQNRSAFTRHMNALLSSTAHSDEGYIVIIRLAHLNAINTSLGAQEGDNYVTSVAN 300

Query: 297 RLK--NSITIKDISIARISTYEFGIIMPNMDETELKIVAESIITCVDDINPDPTGMAKAN 354
            LK  +  + +   + R+S  +F ++   + + E     E +   +   NP   G+   +
Sbjct: 301 ILKQFSKESAETTHLFRLSGADFALVTEAISKRECSNKIEDLSETLVHCNPLKDGI--RS 358

Query: 355 LSLGVVSNKRQSSTTTLLSLLDNALAKAKSNPELNYGFISSDTDKIILGKQQWKTLVEEA 414
           + +GV     + S + ++   D+AL  A        G+  +     +     W+  +   
Sbjct: 359 VWMGVAQFSDKQSFSEIMENADSALMAATKQAN---GWQFASELSHLHSNTAWRERLNVI 415

Query: 415 IHNDWFTFRYQAANSSWGKT-FHREVFSAF--EKDGVRYTANQFLFALEQLNASHIFDQY 471
           +   +     Q   S    T  + E F+ F  ++ G     +Q + A E+LN     D+ 
Sbjct: 416 LEQQYADMLIQPVMSIAENTPSYFEAFARFKDKESGSVIPMSQLIPASERLNLIPEVDKL 475

Query: 472 VIERVIQQLEKGELTDPLAINIAQGSISQPSFIRWISQTLSKHLSVANLLHFEIPEGCFV 531
           V   V ++L + +    +AINIA  S++   F  W+   L+++ ++   L FE  +   +
Sbjct: 476 VATLVFKKLSQAKC--DVAINIANASLANSHFRTWLVAQLNQNTALCTKLVFEFEDSALI 533

Query: 532 NEPHYTALFCNAVRNAGADFGVDNYGRNFQSLDYINEFRPKYVKLDYLFTH--HLDDERQ 589
           +    T  FC  +   G    ++++G N  SL  +   +P +VK+    T   H D + Q
Sbjct: 534 HHKDDTISFCKTLMTLGCRVTIEHFGENLASLAGLRAIQPHFVKISGKLTKDIHTDKDNQ 593

Query: 590 KFTLTSISRTAHNLGITTIASRVETQTQLDFLSEHFIEVFQGFIVDK 636
            F ++S+   A  L I  IA  VE + +   L++  +   QGF   K
Sbjct: 594 LF-VSSLLSIARGLNINVIAELVENEAESVALTQLDVAYQQGFYFAK 639