Pairwise Alignments

Query, 481 a.a., HlyD family type I secretion periplasmic adaptor subunit from Vibrio cholerae E7946 ATCC 55056

Subject, 447 a.a., Type I secretion system membrane fusion protein PrsE from Xanthobacter sp. DMC5

 Score =  143 bits (361), Expect = 1e-38
 Identities = 125/445 (28%), Positives = 208/445 (46%), Gaps = 34/445 (7%)

Query: 49  SARIILWVMVAFFILAIA-WASWAEIDKVTVGQGKVVPSSQVQVIQNLEGGLVKQILVRE 107
           S  ++ + ++A   L    WA+ A +D   V  G +   S+ QV+Q+LEGG+V  ILV+E
Sbjct: 24  SVALLGYALIAVTFLGFGGWAAMARVDGAVVAPGVIGVESKRQVVQHLEGGIVAAILVQE 83

Query: 108 GEQVQKGQQLILLDDTRFRSDFREREQQVANLTASVLQLSASISSVIIDENFEEKNWANS 167
           G+ V++ + L  LD T+ R          AN  A++ Q  A+++        E +  A  
Sbjct: 84  GQTVRRDETLFRLDPTQSR----------ANDEAALAQRRAALT-------LEARLVAE- 125

Query: 168 VQLDYSKLAFPPVLSD--SQPDLVERQRDQYRQDLDN---LRNQLSVLSQQIKQKQQDLI 222
            + D   + FPP L +    P + E   DQ  Q  D     ++Q+ +L+ +I Q   +L 
Sbjct: 126 -RDDAPAITFPPELLELARVPAVREAMADQIAQFRDRRAAFQSQIDILNGRIVQLGHELE 184

Query: 223 EAEARIINLRQSYDYAKKELDITEPLANEGVVPKIELLKLQRQ---LNDTRRELTSTELK 279
                  + RQ   + + EL     L  + +V K  +  L+R+   L+       + E K
Sbjct: 185 GLAQERASARQQLAFVEDELTAVRELERKHLVNKSRVSSLEREKARLDGLVGRNIADEAK 244

Query: 280 IPVLKSAVREAMLSRINAAQKFRTEQQDKLNQAQDKLSSLTESAVGLEDKVNRTVVVSPV 339
               + ++ E  +  +   Q+   +   +L   ++KL+ L E        + R  + +P 
Sbjct: 245 ---ARGSIGEQKMQIVQLTQQRAEDVGSQLLDIREKLAELKEKVQVTRSVLERIEIRAPS 301

Query: 340 TGTVKTL--YVNTVGGVIQPGMNIIEIVPTEDTLLVEAQIAPQDIVFLRPDLPAIVKFSA 397
            G V+ +   + TVG V++PG  ++EIVP +  L+VEA++  QDI  L       V+F A
Sbjct: 302 GGIVQNINPRIYTVGAVVRPGDTLLEIVPVDAPLVVEARVPVQDIDRLDLHEAVEVRFPA 361

Query: 398 YDFTRYGGLEGTLEHISADTTQDEEGNS-FYLVRVRTKETTLGHDQNLPIIPGMTASVDI 456
           +       + G L  +S D   DE  +  ++L RV   ET +  D    + PGM A V  
Sbjct: 362 FHGRTTPMVLGHLASVSRDRLVDETTHQPYFLARVGVDETDVPADLRSRLQPGMDAEVAF 421

Query: 457 ITGKRTVLDYLLKPILSAQSNALRE 481
            TG RTV+ YLL+P+  A + A  E
Sbjct: 422 HTGSRTVMSYLLRPLADAMARAFTE 446