Pairwise Alignments

Query, 481 a.a., HlyD family type I secretion periplasmic adaptor subunit from Vibrio cholerae E7946 ATCC 55056

Subject, 432 a.a., Type I secretion membrane fusion protein, HlyD family @ Type I secretion system, membrane fusion protein LapC from Variovorax sp. SCN45

 Score =  224 bits (571), Expect = 5e-63
 Identities = 148/437 (33%), Positives = 226/437 (51%), Gaps = 70/437 (16%)

Query: 50  ARIILWVMVAFFILAIAWASWAEIDKVTVGQGKVVPSSQVQVIQNLEGGLVKQILVREGE 109
           A +++W++    +  +AWA   ++D+V+ G GKVVPSS+ Q+IQ+LEGG++  + VREG+
Sbjct: 60  ASLLVWIIAGLLLALLAWAWSFKLDEVSTGSGKVVPSSREQMIQSLEGGILVDLKVREGD 119

Query: 110 QVQKGQQLILLDDTRFRSDFREREQQVANLTASVLQLSASISSVIIDENFEEKNWANSVQ 169
            V +G+ L  LD T+  S  +E   +V    A   +L+A +                   
Sbjct: 120 IVDEGEVLAQLDRTKTESTVQESASRVRAALAMSARLTAEVGG----------------- 162

Query: 170 LDYSKLAFPPVLSDSQPDLVERQRDQYRQDLDNLRNQLSVLSQQIKQKQQDLIEAEARII 229
              + LAFPP +S S  DLV  +   Y+   + L + LS ++Q +               
Sbjct: 163 ---TPLAFPPEVS-SDADLVRTETALYQSRREQLASSLSGVTQALS-------------- 204

Query: 230 NLRQSYDYAKKELDITEPLANEGVVPKIELLKLQRQLNDTRRELTSTELKIPVLKSAVRE 289
                    ++EL +TEPL   G    +E+L+L+RQ+N+        E K   LKS    
Sbjct: 205 -------LMRRELALTEPLVARGAASDVEVLRLKRQINEA-------ETKAADLKS---- 246

Query: 290 AMLSRINAAQKFRTEQQDKLNQAQDKLSSLTESAVGLEDKVNRTVVVSPVTGTVKTLYVN 349
                     ++  + ++ L +A  ++ +      G  D + R    SPV G VK + V 
Sbjct: 247 ----------QYYVKAREDLAKANAEIEAQRSVTRGRSDSLTRLTFASPVRGIVKDIAVT 296

Query: 350 TVGGVIQPGMNIIEIVPTEDTLLVEAQIAPQDIVFLRPDLPAIVKFSAYDFTRYGGLEGT 409
           TVGGV+ PG  ++ IVP ++ LLVEA+I+P+D+ F+ P   A VK +AYD+  +G L G 
Sbjct: 297 TVGGVLPPGGKLMVIVPLDEKLLVEARISPRDVAFIHPGQEAAVKVTAYDYAIFGDLPGK 356

Query: 410 LEHISADTTQDEEGNSFYLVRVRTKETTLGH-----DQNLPIIPGMTASVDIITGKRTVL 464
           +  IS DT QD+     Y  RV  + T + H      Q+ PI+PGM A+VDI TG ++VL
Sbjct: 357 VTTISPDTIQDDVKRDVYYYRVYIR-TDVDHLKNKNGQSFPIVPGMIATVDIRTGSKSVL 415

Query: 465 DYLLKPILSAQSNALRE 481
           DYLLKP L+    ALRE
Sbjct: 416 DYLLKP-LNKAGEALRE 431