Pairwise Alignments

Query, 481 a.a., HlyD family type I secretion periplasmic adaptor subunit from Vibrio cholerae E7946 ATCC 55056

Subject, 446 a.a., Metalloprotease secretion protein from Pseudomonas putida KT2440

 Score =  174 bits (442), Expect = 4e-48
 Identities = 134/435 (30%), Positives = 211/435 (48%), Gaps = 26/435 (5%)

Query: 54  LWVMVAFFILAIAWASWAEIDKVTVGQGKVVPSSQVQVIQNLEGGLVKQILVREGEQVQK 113
           +W+++A F   + W+  A +D   V  G V  +S  + +Q+L GG V+ I+VREG+ V+K
Sbjct: 30  VWLVIAGFGGFLLWSCLAPLDAGVVATGTVKVTSNRKAVQHLSGGTVEAIMVREGDVVKK 89

Query: 114 GQQLILLDDTRFRSDFREREQQVANLTASVLQLSASISSVIIDENFEEKNWANSVQLDYS 173
           GQ+++ LD  R            A      L     +S  + +    E++  ++V  D +
Sbjct: 90  GQEVVRLDALR------------AVAEQGALSAQYIVSKTVENRLEAERDGRDTVTFDPA 137

Query: 174 KLAF----PPVLS--DSQPDLVERQRDQYRQDLDNLRNQLSVLSQQIKQKQQDLIEAEAR 227
            L      P +L+  D Q  L++ +R     +L  L   L+  + Q+K  QQ +  A A 
Sbjct: 138 LLEHYANDPRLLAAMDLQQRLLDTRRAGLAGELSILEENLTASAVQLKGLQQ-VYGARAS 196

Query: 228 IINLRQSYDYAKKELDITEPLANEGVVPKIELLKLQRQLNDTRRELTSTELKIPVLKSAV 287
            I       +  +EL  T  LA EG VP+  LL+L+R   D           I   +S  
Sbjct: 197 QIG------FLNQELQGTRVLAAEGYVPRNRLLELERSNADLSAGQAENLNNIARARSQA 250

Query: 288 REAMLSRINAAQKFRTEQQDKLNQAQDKLSSLTESAVGLEDKVNRTVVVSPVTGTVKTLY 347
            E  L  +     +  E + +L     + ++L +    L+ +V  TV+ SP+ G V+ L 
Sbjct: 251 TEIKLRILQRQHDYLKEVESQLTDTAKENTTLADRLRALDYEVTHTVIRSPIDGMVQGLS 310

Query: 348 VNTVGGVIQPGMNIIEIVPTEDTLLVEAQIAPQDIVFLRPDLPAIVKFSAYDFTRYGGLE 407
           + TVGG+IQPG  I+E+VP +  L V+A I  Q I  + P L   + F A++  +   + 
Sbjct: 311 IATVGGIIQPGAKIMEVVPLDQPLQVDAMIPVQAIDKMVPGLAVDIAFPAFNHAQTPNIP 370

Query: 408 GTLEHISADTTQDEEGNS-FYLVRVRTKETTLGHDQNLPIIPGMTASVDIITGKRTVLDY 466
           G ++ ISAD   DEE    FYL +V      +G   +  I PGM A+V I TG+R +L Y
Sbjct: 371 GRVKTISADRLLDEESKQPFYLAQVEVTPAGMGLLGSNHIRPGMPATVTIKTGERNLLSY 430

Query: 467 LLKPILSAQSNALRE 481
           LLKP+L     A +E
Sbjct: 431 LLKPMLERVDAAFKE 445