Pairwise Alignments

Query, 481 a.a., HlyD family type I secretion periplasmic adaptor subunit from Vibrio cholerae E7946 ATCC 55056

Subject, 441 a.a., HlyD family secretion protein from Pseudomonas putida KT2440

 Score =  184 bits (467), Expect = 5e-51
 Identities = 130/438 (29%), Positives = 225/438 (51%), Gaps = 29/438 (6%)

Query: 51  RIILWVMVAFFILAIAWASWAEIDKVTVGQGKVVPSSQVQVIQNLEGGLVKQILVREGEQ 110
           RI L V+   F +   WA++A +     G G V   +  + +Q+LEGG+VK++  R+G+ 
Sbjct: 25  RIGLTVVFVTFGIFGTWAAFAPLSNAVHGTGVVTVQNYRKTVQHLEGGIVKELHARDGDL 84

Query: 111 VQKGQQLILLDDTRFRSDFREREQQVANLTASVLQLSASISSVIIDENFEEKNWANSVQL 170
           V+KG  LI+LD+++  +++     Q+        +L A            E++  +S+  
Sbjct: 85  VKKGDPLIVLDESQLSAEYESTRNQLIVARYKEARLRA------------ERDGLDSIP- 131

Query: 171 DYSKLAFPPVLSDSQPDLVERQRDQYRQDLDNLRNQLSVLSQQIKQKQQ------DLIEA 224
               +      SD   + +  ++  ++   D+L  ++SV  ++I+Q QQ      D+I  
Sbjct: 132 ---SVIMEGTDSDRAQEALAGEQQVFKARHDSLLGEISVNRERIQQMQQQIAGLNDMIRT 188

Query: 225 EARIINLRQSYDYAKKELDITEPLANEGVVPKIELLKLQRQLNDTRRELTSTELKIPVLK 284
           +A    L +SY    K+L   + L  EG V    LL+ +R+L+  + E+   +  I   K
Sbjct: 189 KA---GLNKSYSGEIKQL---KELLAEGFVDNQRLLEQERKLDMLKTEVADHQSSITKTK 242

Query: 285 SAVREAMLSRINAAQKFRTEQQDKLNQAQDKLSSLTESAVGLEDKVNRTVVVSPVTGTVK 344
             + E  L  +   +KF  +   +L+  Q ++  L E    L D+++R V+ +P +G V 
Sbjct: 243 LQIGETELQIVQLKKKFDADVAKELSDVQAQVFDLQEKEAALRDRLSRVVIRAPESGMVL 302

Query: 345 TLYVNTVGGVIQPGMNIIEIVPTEDTLLVEAQIAPQDIVFLRPDLPAIVKFSAYDFTRYG 404
            + V+T+GGV+     +++IVP +  L+VEA++AP+DI  L     A V+FSA++     
Sbjct: 303 DMKVHTIGGVVSAATPLLDIVPAQSDLVVEAKVAPRDIDRLELGKTADVRFSAFNQATTP 362

Query: 405 GLEGTLEHISADT-TQDEEGNSFYLVRVRTKETTLGHDQNLPIIPGMTASVDIITGKRTV 463
            +EG L  ISAD+  ++  G+ +YLVRV+  E  +    N  + PGM A V I  G RT+
Sbjct: 363 VIEGKLTRISADSLVEERSGDQYYLVRVKVTEDGMKKLGNRKLQPGMPAEVLINAGDRTM 422

Query: 464 LDYLLKPILSAQSNALRE 481
           L YLLKP  +  + +L E
Sbjct: 423 LQYLLKPARNMFAESLIE 440