Pairwise Alignments

Query, 481 a.a., HlyD family type I secretion periplasmic adaptor subunit from Vibrio cholerae E7946 ATCC 55056

Subject, 461 a.a., HlyD family type I secretion periplasmic adaptor subunit from Magnetospirillum magneticum AMB-1

 Score =  197 bits (502), Expect = 5e-55
 Identities = 124/434 (28%), Positives = 233/434 (53%), Gaps = 26/434 (5%)

Query: 44  LNTPHSARIILWVMVAFFILAIAWASWAEIDKVTVGQGKVVPSSQVQVIQNLEGGLVKQI 103
           L  P ++ +++W  +AF +L +  ++  EID+V   Q ++ PSSQV+ +Q+ EGG + ++
Sbjct: 20  LTPPSASWLLVWSALAFAVL-VGGSAVLEIDEVVTAQARIEPSSQVRHVQHFEGGTISEV 78

Query: 104 LVREGEQVQKGQQLILLDDTRFRSDFREREQQVANLTASVLQLSASISSVIIDENFEEKN 163
           LV EG  V +G  L+ L +++   D  ++  + A   A   +L A +      +N  E  
Sbjct: 79  LVHEGTLVAEGDVLVRLINSQGAGDLADKRARWAAFHARAARLRADL------DNVAEIR 132

Query: 164 WANSVQLDYSKLAFPPVLSDSQPDLVERQRDQYRQDLDNLRNQLSVLSQQIKQKQQDLIE 223
           W   V++D               +  +R+   + + L +   Q +V+S++I++++++++E
Sbjct: 133 WPRDVEID--------------AETRKRELAIHAERLSHRAQQATVISREIERRRREVVE 178

Query: 224 AEARIINLRQSYDYAKKELDITEPLANEGVVPKIELLKLQRQLNDTRRELTSTELKIPVL 283
            E ++  L ++     +E+ I     + GVV   E++KL+R+      E+++    I  L
Sbjct: 179 TETKVTGLSRAQAKGVEEMRIKRKAYDSGVVGNQEIVKLEREQLMLDTEVSTARDSISRL 238

Query: 284 KSAVREAMLSRINAAQKFRTEQQDKLNQAQDKLSSLTESAVGLEDKVNRTVVVSPVTGTV 343
           K+ + EA        + +R    D+  + + +LS+L  +     D+ +R+ + SPV G V
Sbjct: 239 KAQMSEAEARLSEFEKGWRAGVLDETGKVEAELSALRATMEVATDRESRSEIRSPVRGIV 298

Query: 344 KTLYVNTVGGVIQPGMNIIEIVPTEDTLLVEAQIAPQDIVFLRPDLPAIVKFSAYDFTRY 403
           K   + +VG V +PG  +++IVP +D L+VEA++ PQDI  LRP L A V+ SAYD  R+
Sbjct: 299 KMSAIASVGQVARPGDTLMDIVPVDDALVVEAKVPPQDIGHLRPGLAASVRLSAYDQFRF 358

Query: 404 GGLEGTLEHISADTTQDEEG---NSFYLVRVRTKETTL--GHDQNLPIIPGMTASVDIIT 458
           G L G +  + AD+ ++  G    ++Y V++R+ +T L  G     P+  GM  +  I+ 
Sbjct: 359 GALPGHVVMVGADSFEETRGATTATYYKVQIRSDKTELLDGKGVAWPVRSGMAGTASIVI 418

Query: 459 GKRTVLDYLLKPIL 472
           G +++L  +L P+L
Sbjct: 419 GSKSILRMVLDPLL 432