Pairwise Alignments

Query, 481 a.a., HlyD family type I secretion periplasmic adaptor subunit from Vibrio cholerae E7946 ATCC 55056

Subject, 589 a.a., HlyD family type I secretion periplasmic adaptor subunit from Magnetospirillum magneticum AMB-1

 Score =  219 bits (557), Expect = 3e-61
 Identities = 139/457 (30%), Positives = 248/457 (54%), Gaps = 28/457 (6%)

Query: 33  DYVDDKTAALLLNTPHSARIILWVMVAFFILA-----IAWASWAEIDKVTVGQGKVVPSS 87
           DY   +  + L +  +S  +  W  +A  +++     I WA  A +D+V + +G++VP  
Sbjct: 152 DYHAPEFGSRLYSLANSYPLPTWRPLARAVMSLTAIFIVWAFVAHLDEVAIAEGEIVPEG 211

Query: 88  QVQVIQNLEGGLVKQILVREGEQVQKGQQLILLDDTRFRSDFREREQQVANLTASVLQLS 147
           +V+VIQ+LEGG+V++I+  +G +V++G  LILLD              V++L    LQ  
Sbjct: 212 KVKVIQHLEGGVVREIMATDGSEVKEGAPLILLD------------LPVSSLNKEELQ-- 257

Query: 148 ASISSVIIDENFEEKNWANSVQLDYSKLAFPPVLSDSQPDLVERQRDQYRQDLDNLRNQL 207
           A +   I+     E       +L    + FP   +  QP LVE +R  +      L   L
Sbjct: 258 ARMDGYILQRARLE------AELHDKPVVFPEEEAKRQPGLVESERRSFEARRQALNATL 311

Query: 208 SVLSQQIKQKQQDLIEAEARIINLRQSYDYAKKELDITEPLANEGVVPKIELLKLQRQLN 267
           +VL  Q++QK  ++ E E +  ++  S   +++ L ++  L   G+  K++ +++Q Q+ 
Sbjct: 312 TVLRDQVRQKGLEVQEYETKSRSIATSLRLSQERLAMSTDLIKSGLASKMDHVQIQAQVE 371

Query: 268 DTRRELTSTELKIPVLKSAVREAMLSRINAAQKFRTEQQDKLNQAQDKLSSLTESAVGLE 327
           D + +L S    IP  ++A +EA         +F+   Q ++++A+  ++   E  +   
Sbjct: 372 DLKGQLDSVRASIPRAEAAQQEAKGRVSEELARFQRTAQSEMSEAELNIARTRELFIQAT 431

Query: 328 DKVNRTVVVSPVTGTVKTLYVNTVGGVIQPGMNIIEIVPTEDTLLVEAQIAPQDIVFLRP 387
           D+  RT++ SP+ G VK +  NT+GGV++PG  I+EIVP  + L V+A++ P D  +++ 
Sbjct: 432 DQQRRTLISSPIDGIVKNMRSNTIGGVVRPGDPIMEIVPLHERLQVDAKLNPMDRGYVQT 491

Query: 388 DLPAIVKFSAYDFTRYGGLEGTLEHISADTTQDEEGNS--FYLVRVRTKETTLGHDQNLP 445
              A VK SAYD+T YGGL+G +  ++ DTT  +  N+  +Y V V+T    +G +    
Sbjct: 492 GQRATVKISAYDYTTYGGLDGDVILVAPDTTVPQTPNAQPYYRVVVQTDRAYIGDETAKR 551

Query: 446 II-PGMTASVDIITGKRTVLDYLLKPILSAQSNALRE 481
           +I  GM A+V+I TG R+++++L+KP++  +  A RE
Sbjct: 552 LISAGMQATVEIHTGTRSIMEFLVKPVIKLRHEAFRE 588