Pairwise Alignments

Query, 481 a.a., HlyD family type I secretion periplasmic adaptor subunit from Vibrio cholerae E7946 ATCC 55056

Subject, 468 a.a., HlyD family type I secretion periplasmic adaptor subunit from Magnetospirillum magneticum AMB-1

 Score =  199 bits (506), Expect = 2e-55
 Identities = 126/420 (30%), Positives = 218/420 (51%), Gaps = 26/420 (6%)

Query: 65  IAWASWAEIDKVTVGQGKVVPSSQVQVIQNLEGGLVKQILVREGEQVQKGQQLILLDDTR 124
           + WAS+ ++ ++   +G+++P+ QVQ +Q+LEGG+V+ IL R+G+ V+ G  ++ L+  +
Sbjct: 71  VVWASFTDVPEIATAEGQIIPTGQVQAVQHLEGGIVQDILARDGDLVEAGAPIVRLNAAQ 130

Query: 125 FRSDFREREQQVANLTASVLQLSASISSVIIDENFEEKNWANSVQLDYSKL--AFPPVLS 182
             SD  +   + A L     +L A                A   Q D+S +   +  ++S
Sbjct: 131 AISDLEQTRAREATLLIKAERLRAL---------------AEERQPDFSNMPKGYDRLMS 175

Query: 183 DSQPDLVERQRDQYRQDLDNLRNQLSVLSQQIKQKQQDLIEAEARIINLRQSYDYAKKEL 242
           D+    +   + Q R          SV+  Q++QK+ DL   E++  +LR+     ++E+
Sbjct: 176 DNMA--IFNSQSQARD------TSRSVILSQMEQKRSDLRLLESQERSLREQLGPLQEEM 227

Query: 243 DITEPLANEGVVPKIELLKLQRQLNDTRRELTSTELKIPVLKSAVREAMLSRINAAQKFR 302
            + + L  +G+V ++  L  +R+L+  + EL     +    + A+ E     ++     +
Sbjct: 228 TMRQELVAKGLVSRVVFLDTKRELSRVQGELARLIGQEVTAREALSEVENRLMDNKSSLQ 287

Query: 303 TEQQDKLNQAQDKLSSLTESAVGLEDKVNRTVVVSPVTGTVKTLYVNTVGGVIQPGMNII 362
               D L    ++L+ + ES   LED+V R  +++PV G VK L V   G VIQ G N+ 
Sbjct: 288 KSTMDDLGTTINELAQVQESIGRLEDRVARLEIIAPVRGLVKGLTVKNQGAVIQAGGNVC 347

Query: 363 EIVPTEDTLLVEAQIAPQDIVFLRPDLPAIVKFSAYDFTRYGGLEGTLEHISADTTQDEE 422
           E+VP E  + V+A+I  +D+  L+   P  VK + YDF RYG ++GTL  ISA +  DE+
Sbjct: 348 EVVPVETQMKVDAKINTKDVGHLKIGQPVRVKVTTYDFARYGAVDGTLTKISASSFADEK 407

Query: 423 GNSFYLVRVRTKETTLG-HDQNLPIIPGMTASVDIITGKRTVLDYLLKPILSAQSNALRE 481
           GN F+   +  K   +G       I PGM+ + +IITG +T+L Y+LKPI +    +  E
Sbjct: 408 GNPFFKGVIDLKHNYVGLTPGRYGIQPGMSVTAEIITGDKTLLQYMLKPIFTQIQQSFHE 467