Pairwise Alignments

Query, 481 a.a., HlyD family type I secretion periplasmic adaptor subunit from Vibrio cholerae E7946 ATCC 55056

Subject, 391 a.a., hemolysin D from Escherichia coli ECRC100

 Score =  213 bits (543), Expect = 7e-60
 Identities = 147/444 (33%), Positives = 227/444 (51%), Gaps = 70/444 (15%)

Query: 44  LNTPHSARIILWVMVAFFILA--IAWASWAEIDKVTVGQGKVVPSSQVQVIQNLEGGLVK 101
           L  P   R  L V V   +L   + WA + ++D+VT G G V PS + QV+Q+LEGG++ 
Sbjct: 11  LTEPRLPRSALAVRVTAVMLLCFLGWAWYFQLDEVTTGSGTVEPSGREQVVQSLEGGILY 70

Query: 102 QILVREGEQVQKGQQLILLDDTRFRSDFREREQQVANLTASVLQLSASISSVIIDENFEE 161
            + V+ G+ V++GQ L  L+ T+  SD +E   ++    A+  +L A +S+         
Sbjct: 71  HLDVKVGDIVEQGQPLAQLNRTKTESDVQEAMSRLYAALATSARLRAEVSN--------- 121

Query: 162 KNWANSVQLDYSKLAFPPVLSDSQPDLVERQRDQYRQDLDNLRNQLSVLSQQIKQKQQDL 221
                        L FP  L +  P+L+E +   Y    D L    + L+Q I       
Sbjct: 122 -----------KPLVFPDEL-NKFPELIESETALYNTRRDGLNKATTGLTQGIS------ 163

Query: 222 IEAEARIINLRQSYDYAKKELDITEPLANEGVVPKIELLKLQRQLNDTRRELTSTELKIP 281
                 ++N         +EL +T+PL  +G    +E+L+LQRQ N+   +L+       
Sbjct: 164 ------LVN---------RELAMTQPLVKQGAASSVEVLRLQRQANELENKLS------- 201

Query: 282 VLKSAVREAMLSRINAAQKFRTEQQDKLNQAQDKLSSLTESAVGLEDKVNRTVVVSPVTG 341
                         +   ++  + +++L +A  ++ +      G ED + R    +PV G
Sbjct: 202 --------------DVRTQYYVQAREELAKANAEVETQRSVIRGREDSLTRLNFTAPVRG 247

Query: 342 TVKTLYVNTVGGVIQPGMNIIEIVPTEDTLLVEAQIAPQDIVFLRPDLPAIVKFSAYDFT 401
            V+ + V TVGGVI PG  ++ IVP ++ LL+EA+I+P+D+ F+ P   ++VK +AYD++
Sbjct: 248 IVQDIDVTTVGGVIAPGGKLMTIVPLDEQLLIEAKISPRDVAFIHPGQKSLVKITAYDYS 307

Query: 402 RYGGLEGTLEHISADTTQDEEGNS--FYLVRVRTKETTLGH--DQNLPIIPGMTASVDII 457
            YGGL G +  IS DT QDE      +Y V +RT    L +   Q  PI PGM A+VDI 
Sbjct: 308 IYGGLPGEVAVISPDTVQDEVRRDVYYYRVYIRTFSNHLENKSKQQFPIFPGMVATVDIR 367

Query: 458 TGKRTVLDYLLKPILSAQSNALRE 481
           TGK++VLDYLLKP   AQ  ALRE
Sbjct: 368 TGKKSVLDYLLKPFNKAQ-EALRE 390