Pairwise Alignments

Query, 481 a.a., HlyD family type I secretion periplasmic adaptor subunit from Vibrio cholerae E7946 ATCC 55056

Subject, 387 a.a., Multidrug resistance efflux pump from Echinicola vietnamensis KMM 6221, DSM 17526

 Score = 56.2 bits (134), Expect = 2e-12
 Identities = 41/164 (25%), Positives = 76/164 (46%), Gaps = 3/164 (1%)

Query: 306 QDKLNQAQDKLSSLTESAVGLEDKVNRTVVVSPVTGTVKTLYVNTVGGVIQPGMNIIEIV 365
           + +L   Q++   L+ +   L D++++  +++ V+GT+        G  +     I EI 
Sbjct: 213 EQELRDYQNEWDKLSNNKKRLRDQLHQYKIMAGVSGTIINFENIKTGDFVFANQKIAEIS 272

Query: 366 PTEDTLLVEAQIAPQDIVFLRPDLPAIVKFSAYDFTRYGGLEGTLEHISADTTQDEEGNS 425
           P + TL   A + P DI F++P     ++  AY++ ++G LEGT+E IS D     E   
Sbjct: 273 P-DSTLKAVAFLDPADIAFVQPGQRVNLQVDAYNYNQWGLLEGTVEEISKDINMISENQV 331

Query: 426 FYLVRVRTKETTLGHDQNLP--IIPGMTASVDIITGKRTVLDYL 467
            + V     E  L     +   +  GMT +   +  +R++   L
Sbjct: 332 AFRVVCSLAEEALYLKNGVKGNVKRGMTFNGRFLVARRSLYQLL 375