Pairwise Alignments

Query, 481 a.a., HlyD family type I secretion periplasmic adaptor subunit from Vibrio cholerae E7946 ATCC 55056

Subject, 417 a.a., Colicin V secretion protein CvaA from Alteromonas macleodii MIT1002

 Score = 63.9 bits (154), Expect = 1e-14
 Identities = 64/306 (20%), Positives = 133/306 (43%), Gaps = 35/306 (11%)

Query: 189 VERQRDQYRQDLDNL----RNQLSVLSQQIKQKQQDLIEAEARIINLRQSYDYAKKELDI 244
           +E ++ + RQ +  L    R Q   L +Q+ Q ++ L   +A +   +  +  A K+ + 
Sbjct: 121 LEAKQHRTRQSIQRLDVLHRAQRQGLEEQLSQAKRALTALDAIVELSQTQWALALKQWEK 180

Query: 245 TEPLANEGVVPK-------IELLKLQRQLNDTRRELTSTELKIPVLKSAVREAMLSRINA 297
            + L N+G + +       ++ L  ++QL   +++    +  I  L   +  A L +   
Sbjct: 181 AQTLLNQGHISQADYENHTLQRLTAEQQLTLAQKDQNDEKANIAALHHEL--ATLPQ--- 235

Query: 298 AQKFRTEQQDKLNQAQDKLSSLTESAVGLEDKVNRTVVVSPVTGTVKTLYVNTVGGVIQP 357
                 +Q +++   ++ LS LT+  V  +     T+  +P  G +  L V   G  I  
Sbjct: 236 ------QQANEMANVENTLSDLTQQIVSHKSNAEETIY-APHNGVISGLQVKA-GYTIDS 287

Query: 358 GMNIIEIVPTEDTLLVEAQIAPQDIVFLRPDLPAIVKFSAYDFTRYGGLEGTLEHISADT 417
              ++ ++P    +     +  +   FLR      +++ A+ + ++G   G + +IS   
Sbjct: 288 SRPLLTLLPKNADIQARIAVPVRSAGFLRKGQALHIRYDAFPYQKFGVQSGEIVNISPSL 347

Query: 418 TQDEE--------GNSFYLVR--VRTKETTLGHDQNLPIIPGMTASVDIITGKRTVLDYL 467
               E            YLV   + TKE  L +  N+ +  GMT S D+   +RT++++L
Sbjct: 348 VLPGELTDIPISISEPAYLVTATLNTKEI-LAYGNNISLKAGMTFSADVDLSQRTLMEWL 406

Query: 468 LKPILS 473
           ++P+ S
Sbjct: 407 MEPLYS 412