Pairwise Alignments

Query, 481 a.a., HlyD family type I secretion periplasmic adaptor subunit from Vibrio cholerae E7946 ATCC 55056

Subject, 437 a.a., HlyD family secretion protein from Agrobacterium fabrum C58

 Score =  142 bits (359), Expect = 2e-38
 Identities = 109/424 (25%), Positives = 202/424 (47%), Gaps = 16/424 (3%)

Query: 48  HSARIILWVMVAFFILAIAWASWAEIDKVTVGQGKVVPSSQVQVIQNLEGGLVKQILVRE 107
           HSA +++ + +   +    WA++A++    V  G+VV     + IQ+L GG+V +I V E
Sbjct: 17  HSAAVVV-LGLGLLVGMGGWAAFAKLAGAVVATGRVVVEGNSKKIQHLSGGIVSEINVVE 75

Query: 108 GEQVQKGQQLILLDDTRFRSDFREREQQVANLTASVLQLSASISSVIIDENFEEKNWANS 167
           G++V  GQ L+ L  T  +++    E  +A L +   +L A I+    + +F       +
Sbjct: 76  GDRVAAGQILLRLSATVVQANLSIIENTLAQLYSRRARLRAEIAE---EPSFTVTEDLTA 132

Query: 168 VQLDYSKLAFPPVLSDSQPDLVERQRDQYRQDLDNLRNQLSVLSQQIKQKQQDLIEAEAR 227
           +    S   F     DS+ +L   +R+     L  ++ QL+    Q+  + + L   + +
Sbjct: 133 LTSSKSAKTF----IDSEQNLFNSRRNA----LIGMKKQLATRKLQLADEARGL---DVQ 181

Query: 228 IINLRQSYDYAKKELDITEPLANEGVVPKIELLKLQRQLNDTRRELTSTELKIPVLKSAV 287
           +          K+++  T+ L  +G+V    L  L+RQL++   +              +
Sbjct: 182 VEATENELAIVKEDVSKTDELLKKGLVTLQRLNLLKRQLSNLEGQQGQYIAARAQTVGKL 241

Query: 288 REAMLSRINAAQKFRTEQQDKLNQAQDKLSSLTESAVGLEDKVNRTVVVSPVTGTVKTLY 347
            E  L  +   +  ++E    L   +  ++   E      D+++R  + SP+ G +  L 
Sbjct: 242 SELDLQLLQLDEDRKSEVTKDLTSIEATVAEYEERLAATRDQLDRLDIRSPIAGRIYQLS 301

Query: 348 VNTVGGVIQPGMNIIEIVPTEDTLLVEAQIAPQDIVFLRPDLPAIVKFSAYDFTRYGGLE 407
           V+ + GVIQPG  ++ +VP +D L +EA I P+DI  +    P  V+F+A++ +    L 
Sbjct: 302 VHNINGVIQPGEVLMLVVPDKDDLAIEANITPRDIDQIYVGQPVTVRFTAFNQSTTPDLS 361

Query: 408 GTLEHISAD-TTQDEEGNSFYLVRVRTKETTLGHDQNLPIIPGMTASVDIITGKRTVLDY 466
             +  ++ D  T    G S+Y++R+R  +  +GH     + PGM A V I T +R+VL Y
Sbjct: 362 AEVAVVAPDLQTDSRTGTSYYVLRIRPNKAGMGHLPGGKLYPGMPAEVFIQTSERSVLSY 421

Query: 467 LLKP 470
            +KP
Sbjct: 422 FVKP 425