Pairwise Alignments

Query, 246 a.a., helix-turn-helix transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 188 a.a., PAS domain with LuxR-type DNA-binding domain from Variovorax sp. SCN45

 Score = 42.4 bits (98), Expect = 7e-09
 Identities = 33/105 (31%), Positives = 49/105 (46%), Gaps = 17/105 (16%)

Query: 109 GKIQGTIFF----GQDLTDTAILEVGHWVCRATGLSTSTTFKSVADRDTLK--LTARESE 162
           G I G  F+    G  L   A  E G W           TF+ +  R  +K  LT RE E
Sbjct: 89  GSIAGETFWCHVTGHALNRAAPHEAGIW-----------TFEDLGSRRAVKAELTPRERE 137

Query: 163 VLFLLLYGKKPQHIARVMGISIKTVEGYEAKLRSKFGALSKDQLI 207
           V   ++ G   + I + +GIS +TVE + A+L  K+ A +  +L+
Sbjct: 138 VAAQVMRGLTSKEIGKALGISHRTVELHRARLMRKYAASTTAELV 182