Pairwise Alignments

Query, 605 a.a., hypothetical protein from Vibrio cholerae E7946 ATCC 55056

Subject, 660 a.a., gliding motility-associated lipoprotein GldK from Alteromonas macleodii MIT1002

 Score = 80.1 bits (196), Expect = 3e-19
 Identities = 87/383 (22%), Positives = 143/383 (37%), Gaps = 112/383 (29%)

Query: 291 QQEVAWINLAIRSNQHGDRVTIGGVNYGSTPVEVLLPVGKHQIKIEKEGFRTFEQEVNIT 350
           Q+E   +N++   +    +V I G   G TP+ + L    H +  E+EG+R+  + +  +
Sbjct: 317 QEERGQVNISASLSA---KVFIDGSPKGQTPLNLTLQALPHTVTFEREGYRSVTKTITPS 373

Query: 351 SDQTIRVNLHEKANPLRVGQKFADSGK---SKVSAPEVITILPGQYLLGENA-------- 399
           +++ ++V+    A+ L   +     GK   +     ++  + P  + +G  A        
Sbjct: 374 ANKPVKVH----ADMLTEFEARRREGKPLFANTLGIQLSLVTPKAFTMGSPANEKDRQRN 429

Query: 400 --AKQYNLDHAFALSSTPVTVSQFENFVTQTKYKTDAELKNLCISVNESEIAPVSDSDWR 457
              +  +    F +S+  VT +QF  F                                 
Sbjct: 430 ETQRDVSFSRKFWMSNHEVTQAQFAAFA-------------------------------- 457

Query: 458 NPGFKQSKDSPVVCVSQNDAKAYARWLSKETGFT-------------------YRLPTEE 498
             G   S   P+  VS +DA A+  WLS++ G T                   YRLPTE 
Sbjct: 458 --GKGPSSKLPITNVSWSDAVAFTNWLSEKEGLTPFYVVQNGRVTGIDKTSKGYRLPTEA 515

Query: 499 EWEIAA---RAGSKTDYWWGNKFGAGKANTGWAGTSWSNKST-------------SPVKA 542
           EWE  A   R  S T + WGN+F        +A  S S K T             +PV +
Sbjct: 516 EWEFVAKMNRRASPTIFVWGNQFRLRDKQGNFADASLSGKQTFILKDYDDGFADKAPVGS 575

Query: 543 FAPNALGFYDMVGNVWEW----------------------TGDSRGLAKGGAWSFSPEMA 580
           F     GFYD+ GNV EW                       G  + + KG ++  +  + 
Sbjct: 576 FKAERGGFYDLDGNVREWVHDVYQNSPSNQSGTFADYLGPVGQGKHVVKGASFQ-TGRLK 634

Query: 581 KAYSELFVGPTTAANYVGFRVLR 603
              + +  G T  A+ +GFR+ R
Sbjct: 635 NIRASVRSGETEPADDIGFRIAR 657



 Score = 39.7 bits (91), Expect = 4e-07
 Identities = 19/73 (26%), Positives = 41/73 (56%), Gaps = 5/73 (6%)

Query: 286 DMSQQQQEVAWIN-----LAIRSNQHGDRVTIGGVNYGSTPVEVLLPVGKHQIKIEKEGF 340
           D++Q+ ++V  ++     ++I S+  G  V++ G + G TP+ + +  GK++I + K G 
Sbjct: 168 DIAQEIEQVISLSPVKGAISINSSPSGANVSLAGKDMGVTPLSINMNGGKYEIVVTKSGL 227

Query: 341 RTFEQEVNITSDQ 353
              E  + +TS +
Sbjct: 228 EPLEDTIEVTSQR 240