Pairwise Alignments

Query, 287 a.a., AraC family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 235 a.a., Transcriptional regulator, AraC family from Variovorax sp. SCN45

 Score = 66.6 bits (161), Expect = 5e-16
 Identities = 68/249 (27%), Positives = 104/249 (41%), Gaps = 29/249 (11%)

Query: 31  SPKPAELITLPSH---MACHDHSYTQIVIGLKGQAEFEVRGMGNIVGPGQGCVVTSGSDH 87
           SP P   + L  +      H H + Q++IGL G  E EV G G  +G G+  V+  G  H
Sbjct: 7   SPSPRHELALRDYGRSHGSHAHDHFQVLIGLHGVLEIEVEGRGAGIGAGEAQVIAPGERH 66

Query: 88  AFGGVVGQSDILVLNMPVP-----SDDDPLLLRKLNELAVGDVYFQLDGQIQRLIQMLVQ 142
            F G    S  LVL+   P     ++  P    +L+ LA               +   ++
Sbjct: 67  DFNGRKHGSLCLVLDTTQPAWARCAERAPPAATRLHTLA-------------HYLAQCMR 113

Query: 143 EMQASPDDLLLGRACNDTVVALLQRHISALASV-HKESRFDMEVVDRYIEQHLAHRISVA 201
           + QAS   LL G A       LL+      AS   +  R D  ++  +        + VA
Sbjct: 114 QPQASALALLHGPA------LLLEAWSPEPASPDSRRRRIDWALLTDWARARWHEPLGVA 167

Query: 202 QLAGSVFLSESQFHVLFKEQMGLTPHQYVLNKRVDMAKKLIEQGRLNLGQVAELTGFSNQ 261
            LA    LS SQF    +E+ G +P  ++   R+  A++L   G L++ + A  TG+ + 
Sbjct: 168 DLADVACLSPSQFAQRCREEQGTSPMHWLRALRLAHAREL-RLGGLDVAETARRTGYRSP 226

Query: 262 STFTHTFSR 270
           S  T    R
Sbjct: 227 SALTAALRR 235