Pairwise Alignments

Query, 287 a.a., AraC family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 291 a.a., Transcriptional regulator, AraC family from Pseudomonas putida KT2440

 Score = 75.5 bits (184), Expect = 1e-18
 Identities = 62/217 (28%), Positives = 106/217 (48%), Gaps = 10/217 (4%)

Query: 75  PGQGCVVTSG--SDHAFGGVVGQSDILVLNMPVPSDDDPLLLRKLNELAVGDVYFQLDGQ 132
           P + CV+ +G  S+    G +  + + V           LL R+  EL + +  F  D Q
Sbjct: 75  PDKLCVMPAGQESNWVVNGAIRLAHLYVSEAQFALGCVRLLDREPRELQLQEATFLDDPQ 134

Query: 133 IQRLIQMLVQEMQASPDDLLLGRACNDTVV--ALLQRHISALASVHKES----RFDMEVV 186
                + L+Q     P + LL  +    +V  ALL + +     +  +         ++V
Sbjct: 135 QAGRFRQLIQLDWDEPGERLLASSLAHEIVDHALLSQ-VGLRQGLRLKGGLAPNLRRQLV 193

Query: 187 DRYIEQHLAHRISVAQLAGSVFLSESQFHVLFKEQMGLTPHQYVLNKRVDMAKKLIEQGR 246
           D Y+E HL   I++ +LA    LSE  F  +F+   GL PHQY+L +R+  A +L+  G 
Sbjct: 194 D-YLEAHLDQPITLDELALRCNLSEYHFARMFRASFGLPPHQYLLARRLHRACQLLRLGV 252

Query: 247 LNLGQVAELTGFSNQSTFTHTFSRLHGISPSQYKRRF 283
           + LG++A L GF++ S F++ F +  G +P +Y++ F
Sbjct: 253 MPLGEIALLCGFASASHFSNRFRQALGATPGEYRKAF 289