Pairwise Alignments

Query, 287 a.a., AraC family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 244 a.a., transcriptional regulator, AraC family from Agrobacterium fabrum C58

 Score = 62.4 bits (150), Expect = 1e-14
 Identities = 49/233 (21%), Positives = 100/233 (42%), Gaps = 13/233 (5%)

Query: 49  HSYTQIVIGLKGQAEFEVRGMGNIVGPGQGCVVTSGSDHAFGGVVGQSDILVLNMPVPSD 108
           H + QIV+ + G    +V G  + +  G+G  +   + H       Q    + +  V   
Sbjct: 20  HGFVQIVLPVSGHLRIDVAGRQDELSTGRGVFIHRDAPHT------QEATDINHSLVVDI 73

Query: 109 DDPLLLRKLNELAVGDVYFQLDGQIQRLIQMLVQEMQASPDDLLLGRACNDTVVALLQRH 168
           D+ ++  +  E      +  +    ++LI  +   +         GR  +D         
Sbjct: 74  DESVVSERTLEKFARTPFLDIAPDTRQLITYMRGVIGTD------GRR-DDVTGLWAPLL 126

Query: 169 ISALASVHKESRFDMEVVDRYIEQHLAHRISVAQLAGSVFLSESQFHVLFKEQMGLTPHQ 228
           + +LA+   + R  +  +   +        ++  LA    +SES+ H LF E+ GL+PH+
Sbjct: 127 VDSLANERADIRKRLRWLGAVVGAEPFFPWTIDMLAACASISESRLHALFIEEFGLSPHR 186

Query: 229 YVLNKRVDMAKKLIEQGRLNLGQVAELTGFSNQSTFTHTFSRLHGISPSQYKR 281
           +++  R+D    L+ +  L + ++A  +GFS+Q+  T       G +P+ Y+R
Sbjct: 187 WLVGLRMDKVCTLLRESSLPIAEIALRSGFSDQTALTRALRNAVGETPAAYRR 239