Pairwise Alignments

Query, 496 a.a., sodium/proline symporter PutP from Vibrio cholerae E7946 ATCC 55056

Subject, 460 a.a., sodium:solute symporter from Pseudomonas simiae WCS417

 Score =  136 bits (343), Expect = 1e-36
 Identities = 127/469 (27%), Positives = 215/469 (45%), Gaps = 28/469 (5%)

Query: 12  IVYLILMLAIGVYAYQRTKNSADYFLGGRSLGPWPAALSAGASDMSGWLLLGLPGYAYAA 71
           ++Y   ML +G Y  +R K   DY + GR+LGP     +  A+ + G   +G     Y  
Sbjct: 9   LIYAAGMLVLGYYGMRRAKTHEDYLVAGRNLGPSLYMGTMAATVLGGASTVGTVRLGYVH 68

Query: 72  GIESFWLAGGLLVGTWANWLVNAKRLRTYSITTDSLTLPEFLSRRFNDNSKLIQTISAFF 131
           GI  FWL   L  G  A  L  AK L    I     T+ + L +R+N    + +  SA  
Sbjct: 69  GISGFWLCAALGAGIIALNLFLAKPLLKLKI----FTVTQVLEKRYN---PMARQASAVI 121

Query: 132 ILLFFLFYTSSGLVAGGKLFETVFGLDYSTAVIIGTVCVVSYTLFGGFLAVSWTDLVQGL 191
           +L + L    + ++A G + + +FGL +  +V++G   VV Y+  GG  +++ TD+VQ +
Sbjct: 122 MLAYALMIGVTSILAIGTVLQVLFGLPFWISVLLGGGVVVVYSTIGGMWSLTLTDIVQFV 181

Query: 192 LMAAALM--IVPIAAMN-GGFTQLNHDLAAINPELLTLWNDAKGEPLSAIAIISLVAWGL 248
           +    LM  ++PI     GG+ +L   L A +     +  D      + I    +  +G+
Sbjct: 182 IKTVGLMFILLPICLYRVGGWDELVAKLPASSFSFTAIGWD------TIITYFMIYFFGI 235

Query: 249 GYFGQPHILARFKASRSNKDLITARRIAVVWTGLSMAGAILVGLTGLIFVTQSGTIGLDD 308
              GQ  I  R   +R  K    A   A  +  L      L+G+   + +       LD+
Sbjct: 236 -LIGQ-DIWQRVFTARDEKVAKYAGTFAGFYCILYGLACALIGMAAHVLIPD-----LDN 288

Query: 309 GEKIFMLLVNSLFHPVIAGILLAAILAAIMSTADSQLLVSSSALAEDFYKQVFKTDASSE 368
               F  +V       I G+++AA LAA+MSTA + LL +S+ L ED   ++     SS 
Sbjct: 289 VNNAFAAIVKMSLPDGIRGLVIAAALAAMMSTASAGLLAASTVLTEDLLPRLRGGKQSS- 347

Query: 369 DIVRVGRIAVILISLIALFLAMTPDSSVLGLVSYAWAGFGAAFGPALVLSLYWPRMNRHG 428
             + V R+  +L  +  L +A+   + V+  ++ A+          L+ +++W R    G
Sbjct: 348 --LGVNRLFTLLTGIAVLGIALVV-NDVISALTLAYNLLVGGMLIPLIGAIFWKRATTSG 404

Query: 429 ALSGIIVGGVTIVVWKQLSGGWFDVYEIVPGIILSTLSIVVVSLLTGEP 477
           A++ + +G VT +V+  +  G      I   + +  +S VVVSLL+  P
Sbjct: 405 AITSMTLGFVTALVF-MIKDGLDANTPIYYSLAVGLVSFVVVSLLSRRP 452