Pairwise Alignments

Query, 639 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 713 a.a., Methyl-accepting chemotaxis protein from Pseudomonas fluorescens GW456-L13

 Score =  258 bits (658), Expect = 8e-73
 Identities = 173/515 (33%), Positives = 276/515 (53%), Gaps = 24/515 (4%)

Query: 146 ITTEPYVSVTMQTLVVTLAEPVRYQGQLIGVAASNLALDKLIKDVLAIE---VPGKGYAI 202
           I   PY       ++ +  EP+   G   G+  ++L+++ + + +L        G G   
Sbjct: 202 IDPAPYKVGDKIVMLASFIEPIMLNGAFQGIVGADLSVNFIQEMLLGANQKLYSGAGEMA 261

Query: 203 LVNQKGKIVAHPTQDLIL--KPTEEMSAQLTISKLNIAAKDHSLFQLSMDGRDKVLMAEE 260
           L+   G+IVA+         K ++ + ++   +  N+   + +       GR ++ +   
Sbjct: 262 LIGGNGRIVAYTKDPSKFGEKVSDILDSKQIANMANLKRGEVTYTVDKAQGRIELYLPFG 321

Query: 261 VANTD--WLLVMVMDKGVLEQPLNDML-------------MVQIGIGL-GILLVMALLTS 304
           +  TD  W L++ +    +   L  +              M  +G+ + GI L++  L  
Sbjct: 322 IGQTDARWTLMLQLPLNAVMADLQKLQADLDAQRKSDTFGMAMVGLVIAGIGLLVIWLVG 381

Query: 305 WFVARQLNELGNIANALADIAEGDGDLTRRLDVRSQDEVGLLADKFNKFVDRLHQMVKNV 364
             +AR L ++      L DIA+G+GDLTRRL     DE+G +A  FN F+ +L  M+  V
Sbjct: 382 HGIARPLKQM---VAMLDDIAQGEGDLTRRLTSDRADELGSIAKGFNTFLAKLQAMITQV 438

Query: 365 REVSVALTQGADHAAASATQASKRIRTQQDEITMVATAVTEMASATAEIASNAENTAKNA 424
                +++  ++H A  A + +  +  Q  EI  VATAV EM +   ++A NA   A+ A
Sbjct: 439 VTSVQSVSDSSEHTADIAIRTNTGVHKQMAEIDQVATAVQEMTATAQDVARNATQAAQAA 498

Query: 425 TQSVQLGEDGFAQMQQSKQSIDQLAQELTGAVRIISELEVHANEISTILSTIRGIAEQTN 484
           + + Q    G   ++ +  SI  LA E+  AV ++  L   +  I+ IL+ IRGIAEQTN
Sbjct: 499 SHADQAASQGMQIVRDTSNSIGALAVEIGRAVGVVQTLAKDSENINAILTAIRGIAEQTN 558

Query: 485 LLALNAAIEAARAGEQGRGFAVVADEVRVLSQRTHASTEEIQTKIAGLQKVTTTAVSVMT 544
           LLALNAAIEAARAGEQGRGFAVVADEVR L+Q+T  +TEEIQT I  LQ+ T   V VM 
Sbjct: 559 LLALNAAIEAARAGEQGRGFAVVADEVRNLAQKTQKATEEIQTMIQQLQQGTRDVVRVME 618

Query: 545 ESHKLVETSVADVNQTGASLQAISEAIQQISDMATQIASAAEEQSLVTADINVNTESVRE 604
           +S    + SV   ++   +L+ I++A+  I+DM TQIASAAEEQS V  DIN N  ++ +
Sbjct: 619 DSQNRTDESVLHASKAAEALETITQAVSVINDMNTQIASAAEEQSAVADDINRNVINIGQ 678

Query: 605 VSDQLAEEAQQSVQQAKSLHAMAQELNKEISRFKL 639
           V++++A  A +S   +  L  +A++  + I++F++
Sbjct: 679 VANEVAGGADESSAASADLTKLAEQQRRLINQFRV 713