Pairwise Alignments

Query, 639 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 629 a.a., chemotaxis protein from Pseudomonas simiae WCS417

 Score =  293 bits (751), Expect = 1e-83
 Identities = 198/640 (30%), Positives = 330/640 (51%), Gaps = 26/640 (4%)

Query: 15  LKRKMVFSVVVAIAVTAAALVAAGYQTFEKDSWR--AIESESRNTLQ----AHAKGIGDW 68
           + + + FS  + +A +   + A    T   D  +  AI  +  N LQ      A  I  W
Sbjct: 1   MNKNLRFSHKILLAASLIVIAAFALFTLYNDYLQRNAIRDDLNNYLQEMGDVTASNIQTW 60

Query: 69  FLGKQLALKGLREEIERNPQLELVPHL-RQTLQSGSFGLSYYGNEQGEMFRQDPSLNTAD 127
             G+   ++   + I  NP+   V  L  Q   + SF  +Y G+ +G    +  +     
Sbjct: 61  LGGRIALVENAAQNIAINPEPSAVASLLEQKTLTSSFMATYVGDSKGAFTIRPDTKMPDG 120

Query: 128 YDPRVRGWYKEAKAAGKPITTEPYVSVTMQTLVVTLAEPVRYQGQLIGVAASNLALDKLI 187
           +DPRVR WYK A+++     TEPY+      L++++A P     Q IGV   +L+L  L+
Sbjct: 121 FDPRVRPWYKGAQSSNGSTLTEPYIDAATGKLIISVATPSTQGTQSIGVVGGDLSLQTLV 180

Query: 188 KDVLAIEVPGKGYAILVNQKGKIVAHPTQDLILKPTEEMSAQLTISKLNIAAKDHSLFQL 247
            ++ A+   G GYA LV+  GK++ HP ++L++K   ++  + T       + D S  ++
Sbjct: 181 DNIGALNFGGMGYAFLVSADGKVLVHPDKNLVMKTLADVYPKNTPK----ISADFS--EV 234

Query: 248 SMDGRDKVLM---AEEVANTDWLLVMVMDKGVLEQPLNDM-LMVQIGIGLGILLVMALLT 303
             +G+D ++     + + + +W L + +DK      L++      I   + +++++ALL 
Sbjct: 235 EANGKDNIVTFIPIKGLPSVNWDLGISVDKDKSFAMLSEFRTSAVIATFIAVVIIIALL- 293

Query: 304 SWFVARQLNELGNIANALADIAEGDGDLTRRLDVRSQDEVGLLADKFNKFVDRLHQMVKN 363
              +   +  L  +  A+ DIA+G+GDLTRRL +++ DE G+L + FN+FV+R+H    +
Sbjct: 294 GMLIRILMQPLHLMTRAMQDIADGEGDLTRRLTIQNHDEFGMLGNAFNRFVERIHT---S 350

Query: 364 VREVSVALTQGADHAAASATQASKRIRTQQDE----ITMVATAVTEMASATAEIASNAEN 419
           +REVS A T+  +  A     AS       DE       VA A+ ++ +A  EIA NA  
Sbjct: 351 IREVSSA-TEHVNEVALRVVSASNSSMVNSDEQANRTNSVAAAINQLGAAAQEIARNAAQ 409

Query: 420 TAKNATQSVQLGEDGFAQMQQSKQSIDQLAQELTGAVRIISELEVHANEISTILSTIRGI 479
            +  A+ +  L EDG   ++++ ++++QL+  ++ +   I  L      I  IL  I  I
Sbjct: 410 ASHQASDARHLAEDGQQVVERNIKAMNQLSSMISASSSNIEALNSKTVNIGQILEVITSI 469

Query: 480 AEQTNLLALNAAIEAARAGEQGRGFAVVADEVRVLSQRTHASTEEIQTKIAGLQKVTTTA 539
           ++QTNLLALNAAIEAARAGE GRGFAVVADEVR L+ RT  S +++Q  I  LQ     +
Sbjct: 470 SQQTNLLALNAAIEAARAGEAGRGFAVVADEVRNLAHRTQESAQQVQKMIEELQVGARES 529

Query: 540 VSVMTESHKLVETSVADVNQTGASLQAISEAIQQISDMATQIASAAEEQSLVTADINVNT 599
           VS M ES +    SV   N  G  L ++++ I +I  M   +A+A EEQ+ V   IN++ 
Sbjct: 530 VSTMGESQRHSLESVDIANLAGERLNSVTQRIGEIDGMNQSVATATEEQTSVVESINMDI 589

Query: 600 ESVREVSDQLAEEAQQSVQQAKSLHAMAQELNKEISRFKL 639
             +  ++ +  E  Q +++    L   A  L + +  F++
Sbjct: 590 TEINTLNQEGVENLQSTLRACADLEQQAARLKQLVGSFRI 629