Pairwise Alignments

Query, 639 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 645 a.a., chemotaxis protein from Pseudomonas simiae WCS417

 Score =  235 bits (599), Expect = 5e-66
 Identities = 158/521 (30%), Positives = 263/521 (50%), Gaps = 9/521 (1%)

Query: 120 DPSLNTADYDPRVRGWYKEAKAA-GKPITTEPYVSVTMQTLVVTLAEPVRYQGQLIGVAA 178
           DP L  A YDPR R WYK A A+ GK + T  Y        +V  A  +   G+  GV  
Sbjct: 131 DPQL--AKYDPRTRPWYKAAMASPGKTVRTPAYYYDKDDVALVGTARALLENGKAKGVFV 188

Query: 179 SNLALDKLIKDVLAIEVPGKGYAILVNQKGKIVAHPTQDLILKPTEEMSAQLTISKLNIA 238
            +++L  L + V +I++   GY +LV     +V         KP + + A        +A
Sbjct: 189 VSVSLKNLTELVKSIKLGESGYVMLVEDGVVLVDPRNAAHNFKPLKGLGAAYA----QLA 244

Query: 239 AKDHSLFQLSMDGRDKVLMAEEVANTDWLLV-MVMDKGVLEQPLNDMLMVQIGIGLGILL 297
                   + +DG   +          W  + ++  + V+ +      +  + +G+ ++L
Sbjct: 245 ETPQGSTDVVIDGVHYMANVWTSPGLGWRYIGLIEHREVMAEATRMTYLTALIVGV-LVL 303

Query: 298 VMALLTSWFVARQLNELGNIANALADIAEGDGDLTRRLDVRSQDEVGLLADKFNKFVDRL 357
           +  L+ + F    +  +G ++  L  IA+G+GDL   L V+ +DE   LA  FNKF+  +
Sbjct: 304 IFGLIAAAFSKVIVKPIGQVSTGLQSIAQGEGDLRHELQVQGKDETAELAGWFNKFLAAI 363

Query: 358 HQMVKNVREVSVALTQGADHAAASATQASKRIRTQQDEITMVATAVTEMASATAEIASNA 417
            Q+++++   S  L   +   +  A   ++    Q++ + +V+TA  EM +   E+A + 
Sbjct: 364 RQLIQHIGAASANLQNASKVNSEVAHNMNEAAGRQREAVELVSTAFNEMVATANEVARSC 423

Query: 418 ENTAKNATQSVQLGEDGFAQMQQSKQSIDQLAQELTGAVRIISELEVHANEISTILSTIR 477
              A++A    +   +G  Q++ +  ++++L + LT + + + ELE  +  I+ IL TIR
Sbjct: 424 SGAAESAENGHRRVAEGKQQIEVTTDNVNRLGRRLTESSQAMVELEAGSRSINQILGTIR 483

Query: 478 GIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRVLSQRTHASTEEIQTKIAGLQKVTT 537
            IAEQTNLLALNAAIEAARAG+QGRGFAVVADEVR L++RT  ST EI+  +  L+  T 
Sbjct: 484 AIAEQTNLLALNAAIEAARAGDQGRGFAVVADEVRALAKRTSDSTGEIEQLLGTLENKTQ 543

Query: 538 TAVSVMTESHKLVETSVADVNQTGASLQAISEAIQQISDMATQIASAAEEQSLVTADINV 597
                M     L   SV+ +     S + I  ++ +I D   QI++AAEEQ  V  +IN 
Sbjct: 544 EVTQKMGSCLDLSRASVSSIESARDSFEGIQTSVNEIRDQNLQISAAAEEQHSVAEEINR 603

Query: 598 NTESVREVSDQLAEEAQQSVQQAKSLHAMAQELNKEISRFK 638
           + + + + +  +   A  +   +  L  ++ ELN  + RFK
Sbjct: 604 HIQQIYDEARLVESLANSAQDDSGRLSNLSDELNGLVGRFK 644