Pairwise Alignments

Query, 639 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 623 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

 Score =  308 bits (790), Expect = 4e-88
 Identities = 209/631 (33%), Positives = 332/631 (52%), Gaps = 22/631 (3%)

Query: 19  MVFSVVVAIAVTAAALVAAGYQTFEKDSW--RAIESESRNTLQAHAKGIGDWFLGKQLAL 76
           M FS  +  A +A  L      +F++ S     IES  +++L    KG+ +       + 
Sbjct: 1   MRFSQKIVAASSALLLCVIALLSFQQLSTVREEIESLVQDSLMEMVKGVKNTIESDLASK 60

Query: 77  KGLREEIERNPQLELV--PHLRQTLQS----GSF---GLSYYGNEQGEMFRQDPSLNTAD 127
           KGL +      QL+       +  L+S    GSF   GL Y  ++   +   D     AD
Sbjct: 61  KGLAQSTTEILQLDPTNKAFAKSVLESPNLKGSFLAIGLGYE-SDATVVENDDGWEPNAD 119

Query: 128 YDPRVRGWYKEAKAAGKPITTEPYVSVTMQTLVVTLAEPVRYQGQLIGVAASNLALDKLI 187
           YDPR R WY +AK   K + TEPYV ++ + +++++  PV  Q   +G    ++ L +L 
Sbjct: 120 YDPRKRPWYVDAKRERKLVVTEPYVDISTKKIIISIGTPVYQQSNFVGAMFYDVELTQLA 179

Query: 188 KDVLAIEVPGKGYAILVNQKGKIVAHPTQDLILKPTEEMSAQLTISKLNIAAKDHSLFQL 247
           + V ++ +   GY  +  + G  +AHP  +      E+ S  L     N+  K+ +  ++
Sbjct: 180 QLVNSVNLFDAGYLFITTKDGVTIAHPNAE---NNGEKFSQFLP----NVDLKEGTQ-RI 231

Query: 248 SMDGRDKVLMAEEVANTDWLLVMVMDKGVLEQPLNDMLMVQ-IGIGLGILLVMALLTSWF 306
            +DG+  ++   +V +  W +  V+D+ +    ++D+     I   +G+LL +  L S+ 
Sbjct: 232 ELDGKYYLVKFAQVPSESWYIGAVVDESIAFAMVDDLRHSSLIYTVIGVLLSIIGL-SFL 290

Query: 307 VARQLNELGNIANALADIAEGDGDLTRRLDVRSQDEVGLLADKFNKFVDRLHQMVKNVRE 366
           +   +  LG ++ A+ D+A G GDLT+RLD  +  E  +LA  FN F + L + +++++ 
Sbjct: 291 IKVLMKPLGALSRAIEDVASGQGDLTKRLDTNTDMEFAILAKDFNVFCETLQKRIQHLKG 350

Query: 367 VSVALTQGADHAAASATQASKRIRTQQDEITMVATAVTEMASATAEIASNAENTAKNATQ 426
           +   +  G +     A +++  +  Q  E+  +ATA+ EMA    E+A+NA+  A  A +
Sbjct: 351 IGAEIMHGTEQTVLGAHESASAMAQQLQELEQLATAMHEMAVTATEVANNAQGAAAAAHE 410

Query: 427 SVQLGEDGFAQMQQSKQSIDQLAQELTGAVRIISELEVHANEISTILSTIRGIAEQTNLL 486
           + +  +DG   +  + +SID L+  +  AV  +  LEV    I TIL  I  IA+QTNLL
Sbjct: 411 ADEASQDGSKVVSDTTRSIDALSARIEQAVEEVKGLEVATGNIETILKVINDIADQTNLL 470

Query: 487 ALNAAIEAARAGEQGRGFAVVADEVRVLSQRTHASTEEIQTKIAGLQKVTTTAVSVMTES 546
           ALNAAIEAARAGE GRGFAVVADEVR L+QRT  ST EI+  I  LQ   +   + M ES
Sbjct: 471 ALNAAIEAARAGESGRGFAVVADEVRTLAQRTQQSTTEIRNMIEQLQSGASAVSAAMNES 530

Query: 547 HKLVETSVADVNQTGASLQAISEAIQQISDMATQIASAAEEQSLVTADINVNTESVREVS 606
               + +V        SLQ I  AIQ+ISDM  QIASAAEEQSLV  +IN NT  ++++S
Sbjct: 531 KYTADDAVQKAQLANESLQRIRGAIQRISDMNMQIASAAEEQSLVAEEINTNTVKIKDLS 590

Query: 607 DQLAEEAQQSVQQAKSLHAMAQELNKEISRF 637
            Q+A+ A+ +    +      +E  K ++ F
Sbjct: 591 TQVADSAKSASMAMEVQTENVREQGKLLNTF 621