Pairwise Alignments

Query, 639 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 631 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

 Score =  514 bits (1323), Expect = e-150
 Identities = 284/630 (45%), Positives = 393/630 (62%), Gaps = 4/630 (0%)

Query: 11  MRLSLKRKMVFSVVVAIAVTAAALVAAGYQTFEKDSWRAIESESRNTLQAHAKGIGDWFL 70
           M+L+LK K++ + + A+ V A AL        ++ +  A+ + +       AKGI DW  
Sbjct: 5   MKLTLKHKLIGASLSAVVVMATALTWFSASQLQQQTSNAVYTRADAISSTAAKGISDWIS 64

Query: 71  GKQLALKGLREEIERNPQLELVPHLRQTLQSGSFGLSYYGNEQGEMFRQDPSLNTADYDP 130
            ++         IE      +VP+L+Q   +G F   +YG   G M+R  P  N ADYDP
Sbjct: 65  IRKSISTAFNAHIEAQ---NVVPYLQQARNAGGFDDIFYGTTDGAMYRSHPERNRADYDP 121

Query: 131 RVRGWYKEAKAAGKPITTEPYVSVTMQTLVVTLAEPVRYQGQLIGVAASNLALDKLIKDV 190
           R R WYK+A +AGK I T  Y       L+VT+AEPVR  G + GV  +++ +D+LI DV
Sbjct: 122 RTRPWYKDAASAGKQIITTAYSDAITGALLVTIAEPVRLNGNMSGVVGADVLIDQLIADV 181

Query: 191 LAIEVPGKGYAILVN-QKGKIVAHPTQDLILKPTEEMSAQLTISKLNIAAKDHSLFQLSM 249
           ++++       +L++ Q G  +AHP + L+LKP   +S+ L +  +  AA    L  L +
Sbjct: 182 ISMDAGKNAQTMLIDGQNGSFLAHPDKSLLLKPVTTLSSALDMRTIERAANQGELLALKL 241

Query: 250 DGRDKVLMAEEVANTDWLLVMVMDKGVLEQPLNDMLMVQIGIGLGILLVMALLTSWFVAR 309
           +G +K      V +T W   + MD        +++L   I   L I +++ ++ SW V+ 
Sbjct: 242 NGVEKFFFFTAVPDTPWYFAVQMDSDTEYASHSELLTGLITTALLITVIVVVIVSWLVSF 301

Query: 310 QLNELGNIANALADIAEGDGDLTRRLDVRSQDEVGLLADKFNKFVDRLHQMVKNVREVSV 369
              +LG ++ AL +IA GD DLT+RL+ RS DEVG LA  FN FV  +H MV  +  VS 
Sbjct: 302 LFRDLGRVSKALEEIASGDADLTQRLEPRSDDEVGQLASNFNTFVSNMHTMVLKLSHVSA 361

Query: 370 ALTQGADHAAASATQASKRIRTQQDEITMVATAVTEMASATAEIASNAENTAKNATQSVQ 429
           AL Q +   AA A + S RIR QQDEI MVATA+ EMA+AT EIA NA++TA+NA ++V 
Sbjct: 362 ALAQQSKVTAAQAEERSSRIRLQQDEINMVATAINEMAAATQEIAGNADHTAQNAGEAVT 421

Query: 430 LGEDGFAQMQQSKQSIDQLAQELTGAVRIISELEVHANEISTILSTIRGIAEQTNLLALN 489
               G  Q+ Q+++SI  LA+E+  A  +I ELE H ++ISTILSTI+ IAEQTNLLALN
Sbjct: 422 ACVHGAGQVTQTQRSIQSLAEEVQVATEVIQELEAHGHQISTILSTIQNIAEQTNLLALN 481

Query: 490 AAIEAARAGEQGRGFAVVADEVRVLSQRTHASTEEIQTKIAGLQKVTTTAVSVMTESHKL 549
           AAIEAARAGEQGRGFAVVADEVRVLSQRTHAST+EIQ  I  LQ  T  AV +M +S +L
Sbjct: 482 AAIEAARAGEQGRGFAVVADEVRVLSQRTHASTKEIQQMIETLQATTGKAVGIMDDSRRL 541

Query: 550 VETSVADVNQTGASLQAISEAIQQISDMATQIASAAEEQSLVTADINVNTESVREVSDQL 609
            +TSV D N+   SL+ I + +++ISDMATQIASAAEEQ+ VT++I  NT  +R+VS+ L
Sbjct: 542 ADTSVDDANEASVSLEQIHKTVERISDMATQIASAAEEQASVTSEITRNTVGIRDVSNDL 601

Query: 610 AEEAQQSVQQAKSLHAMAQELNKEISRFKL 639
           A+EA  + +QA  L  ++ EL +EI RFKL
Sbjct: 602 AQEAHSAAEQAAELSELSHELEQEIRRFKL 631