Pairwise Alignments

Query, 639 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 626 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

 Score =  213 bits (542), Expect = 2e-59
 Identities = 156/539 (28%), Positives = 257/539 (47%), Gaps = 9/539 (1%)

Query: 101 SGSFGLSYYGNEQ-GEMFRQDPSLNT-ADYDPRVRGWYKEAKAAGKPITTEPYVSVTMQT 158
           S  F L  Y +E+ GE+   DP+      +DPR R WY  AK       +EPYV +  + 
Sbjct: 93  SNVFQLFGYADERTGEIITNDPNFKVPTGFDPRTRSWYLNAKKLNTFSLSEPYVDLITEK 152

Query: 159 LVVTLAEPVRYQGQLIGVAASNLALDKLIKDVLAIEVPGKGYAILVNQKGKIVAHPTQDL 218
           L+VT + P+  +  L GV   ++ LD + + + +      G   +V+  GKI+     D+
Sbjct: 153 LMVTTSAPIYNKNDLTGVIFFDIPLDDVQELIKSYNPFDAGTIFIVDNSGKIIFGNKNDI 212

Query: 219 ILKPTEEMSAQLTISKLNIAAKDHSLFQLSMDGRDKVLMAEEVANTDWLLVMVMDKGVLE 278
             K          +S      KD +       G +  ++ +      W LV ++D     
Sbjct: 213 SGKNLFGDFDSFPLSVSESKTKDKN-------GVNYDVLIKMSDFGGWNLVSIIDHDKAR 265

Query: 279 QPLNDMLMVQIGIGLGILLVMALLTSWFVARQLNELGNIANALADIAEGDGDLTRRLDVR 338
             +  +    I   + +  V   +  + +   L  L  + +A+ +I+ G  DLT R+   
Sbjct: 266 SDIITLRNNSIFTAVILASVFFAILLFTMRLMLKPLHQLTDAMVNISSGSADLTVRIPNS 325

Query: 339 SQDEVGLLADKFNKFVDRLHQMVKNVREVSVALTQGADHAAASATQASKRIRTQQDEITM 398
           +  E   + + FN FV  L  +V  V+  S  +              +  +  Q  E+ M
Sbjct: 326 TDQEFSKIINSFNIFVGNLQSIVSEVKMNSEKINCITTETQELVEVCNNSVADQYRELDM 385

Query: 399 VATAVTEMASATAEIASNAENTAKNATQSVQLGEDGFAQMQQSKQSIDQLAQELTGAVRI 458
           +A+++ EM + + +IA      ++  ++      +G   +    +S+  L ++L     +
Sbjct: 386 LASSMNEMVATSNQIAQITSEASEITSKINGQVNEGVGAVSSVTESVGNLVEKLDKTKSV 445

Query: 459 ISELEVHANEISTILSTIRGIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRVLSQRT 518
           I +L      I  IL  I  IA+QTNLLALNAAIEAARAGE GRGFAVVADEVR L+ +T
Sbjct: 446 IQDLNRQTQNIDVILKAINDIADQTNLLALNAAIEAARAGENGRGFAVVADEVRSLAIKT 505

Query: 519 HASTEEIQTKIAGLQKVTTTAVSVMTESHKLVETSVADVNQTGASLQAISEAIQQISDMA 578
             ST+ I + I  LQ+ +  +V VM ES  +   ++     +   L  IS+++ QI D+ 
Sbjct: 506 QESTKNIGSIIHILQENSLLSVHVMDESFNIASETMTISADSKQCLDNISQSVIQIVDIT 565

Query: 579 TQIASAAEEQSLVTADINVNTESVREVSDQLAEEAQQSVQQAKSLHAMAQELNKEISRF 637
            Q+A+AA EQS V+ +IN N+ S+++ +D L+    +  QQA S  A+    +  IS+F
Sbjct: 566 NQVATAAYEQSHVSEEINSNSISIKDKADTLSSLGNKISQQAYSQKALIGHQDDLISKF 624