Pairwise Alignments

Query, 639 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 626 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

 Score =  294 bits (753), Expect = 7e-84
 Identities = 200/645 (31%), Positives = 327/645 (50%), Gaps = 35/645 (5%)

Query: 11  MRLSLKRKMVFSVVVAIAVTAAALVAAGYQTFEKDSWRAIESESRNTLQAHAKGIG---- 66
           M +   +K++F     + VT A +V  GY T +K+    IE      +    + +     
Sbjct: 1   MNVGFVKKLIFISSFILLVTVAFVVWEGYTTAKKEVSVVIEDGINEIINKTERFVSLKLE 60

Query: 67  -DWFLGKQLALKGLREEIERNPQLELVPH---LRQTLQSGSFGLSYYGNEQGEMFRQDPS 122
            D  L   + +  +   I     +  + +   +++   S  FG     +  G++   DP+
Sbjct: 61  SDISLASSI-VDSISLRISDEQYINDIINGNAIKKAFLSTGFGF----DSNGKVIENDPN 115

Query: 123 LNTAD-YDPRVRGWYKEAKAAGKPITTEPYVSVTMQTLVVTLAEPVR-YQGQLIGVAASN 180
               D YDPR RGWY+EAK   +   TEPY+    +  +V+++ PV       IG    +
Sbjct: 116 WEPEDDYDPRSRGWYQEAKKNKRIFITEPYLDTEGKNFLVSISSPVADTMNNFIGAMYFD 175

Query: 181 LALDKLIKDVLAIEVPGKGYAILVNQKGKIVAHPTQDLILKPTEEMSAQLTISKLNIAAK 240
           + L ++ K+V  I +   GY  + +  GK++ H   D + K  +++     + K  +   
Sbjct: 176 VDLSRIQKNVDDINLFEAGYVFITSNTGKVIIHSNTDELGKNVKDIYNGFRLDKGKVV-- 233

Query: 241 DHSLFQLSMDGRDKVLMAEEVANTDWLLVMVMDKGVLEQPLNDM---LMVQIGIGL---G 294
                 LS++G +K L    +   DW ++ V+D+ +  Q +N M   L+    IGL   G
Sbjct: 234 ------LSVNGVNKWLYTSPILGGDWFIIAVIDESIAMQSINKMKYELIFYSAIGLVFGG 287

Query: 295 ILLVMALLTSWFVARQLNELGNIANALADIAEGDGDLTRRLDVRSQDEVGLLADKFNKFV 354
           ++LV  L       R ++ L  + +A+ DIA G GDLT++LD     E   LA  FN F 
Sbjct: 288 LILVFIL------RRLMSPLKTLDSAIKDIASGGGDLTKKLDTNLDKEFSELALGFNSFT 341

Query: 355 DRLHQMVKNVREVSVALTQGADHAAASATQASKRIRTQQDEITMVATAVTEMASATAEIA 414
           + L   ++ ++ ++  +  GA+  A  A  +   +  Q  E+  +ATA+ EMA   +E+A
Sbjct: 342 EMLGSQIRQLKTIASGVLDGAEKTANEAEVSRLVVEQQLQELEQLATAMNEMAMTASEVA 401

Query: 415 SNAENTAKNATQSVQLGEDGFAQMQQSKQSIDQLAQELTGAVRIISELEVHANEISTILS 474
           ++A+  A  A +      +G + + ++  +I +L+  +  +V  + EL    + I T+L 
Sbjct: 402 NSAQVAADAAKEGESASLEGSSVVHETTDAIQRLSIRIGSSVEDVKELVKATDRIETVLD 461

Query: 475 TIRGIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRVLSQRTHASTEEIQTKIAGLQK 534
            I  IA+QTNLLALNAAIEAARAGE GRGFAVVADEVR L+QRT  ST +I   I  LQ+
Sbjct: 462 VINDIADQTNLLALNAAIEAARAGESGRGFAVVADEVRTLAQRTQQSTMQISEIIEQLQE 521

Query: 535 VTTTAVSVMTESHKLVETSVADVNQTGASLQAISEAIQQISDMATQIASAAEEQSLVTAD 594
                   M ES    +  V   NQ    +  + +AI +ISDM  QIASAAEEQSLV  +
Sbjct: 522 GAKNVSRSMDESKLETDIVVEKTNQVNEKISLVQQAIHRISDMNLQIASAAEEQSLVAEE 581

Query: 595 INVNTESVREVSDQLAEEAQQSVQQAKSLHAMAQELNKEISRFKL 639
           IN NT +++++S +L+E A  +  +  +  +  +E N+ ++ FK+
Sbjct: 582 INNNTVNIKDLSIKLSEAASNAGTEMNAQVSKVKEQNELLNEFKI 626