Pairwise Alignments

Query, 639 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 624 a.a., Methyl-accepting chemotaxis protein PctA from Pseudomonas putida KT2440

 Score =  285 bits (728), Expect = 6e-81
 Identities = 195/638 (30%), Positives = 321/638 (50%), Gaps = 27/638 (4%)

Query: 15  LKRKMVFSVVVAIAVTAAALVAAGYQTFEKDSWR--AIESESRNTLQ----AHAKGIGDW 68
           + + + FS  + +A +   ++A    T   D  +  AI  +  N L     + +  I + 
Sbjct: 1   MNKSLRFSHKILLAASLIVILAFSLFTLYNDYLQRNAIREDLENYLAEMGASTSTNIRNL 60

Query: 69  FLGKQLALKGLREEIERNPQLELVPHLRQTLQSGSFGLSYYGNEQGEMFRQDPSLNTADY 128
           F G+   ++ L + I ++P       + Q     SF   Y G   G    +  +     Y
Sbjct: 61  FEGRIKLVENLAQNIAQDPA-NAETLMGQNALISSFLTVYLGKVDGGFSVRPDAKMPDGY 119

Query: 129 DPRVRGWYKEAKAAGKPITTEPYVSVTMQTLVVTLAEPVRYQGQLIGVAASNLALDKLIK 188
           DPR R WYK+   A     TEPY+ +T   +V+ +   V      +GV   +LALD L++
Sbjct: 120 DPRTRPWYKDGMNASGATLTEPYIDMTTNKMVIGILSKV---SSSVGVVGGDLALDGLVQ 176

Query: 189 DVLAIEVPGKGYAILVNQKGKIVAHPTQDLILKPTEEMSAQLTISKLNIAAKDHSLFQLS 248
            + ++   G GYA LVN +GKI+ HP +DL++K   ++  Q T  KL        L ++ 
Sbjct: 177 IINSLNFGGMGYAFLVNDQGKILVHPDKDLVMKSLSDLFPQHT-PKLT-----GELTEVQ 230

Query: 249 MDGRDKVLMAEEVA---NTDWLLVMVMDKGVLEQPLNDMLMVQIGIGLGILLVMALLTSW 305
            DG+ ++L    +    + +W + + +DK      L+      +   +  ++++  L   
Sbjct: 231 SDGQTRLLTFSPITGLPSANWYIGLSVDKDKAFSMLSTFRTSAVIATVVAVVIIIGLLGL 290

Query: 306 FVARQLNELGNIANALADIAEGDGDLTRRLDVRSQDEVGLLADKFNKFVDRLHQMVKNVR 365
            +   +  L  +  A+ DIAEG+GDLT+RL + S DE G+L + FN+FV+R+H    ++R
Sbjct: 291 LIRVLMQPLHTMTRAMEDIAEGEGDLTKRLHIHSHDEFGVLGNAFNRFVERIHS---SIR 347

Query: 366 EVSVALTQGADHAAASATQASKRIRTQQDE----ITMVATAVTEMASATAEIASNAENTA 421
           EVS A T+  +  A     AS    T  DE       VA A+ E+ +A  EIA NA   +
Sbjct: 348 EVSSA-TEQVNEVALRVISASNSSMTNSDEQSNRTNSVAAAINELGAAAQEIAGNAAQAS 406

Query: 422 KNATQSVQLGEDGFAQMQQSKQSIDQLAQELTGAVRIISELEVHANEISTILSTIRGIAE 481
           ++A+ +  L E+G   ++++  ++++L+  +  +   I  L      I  IL  I  I++
Sbjct: 407 QHASSARLLAEEGQQVVERNIAAMNRLSDLIVTSSAHIETLNSKTVNIGQILEVITSISQ 466

Query: 482 QTNLLALNAAIEAARAGEQGRGFAVVADEVRVLSQRTHASTEEIQTKIAGLQKVTTTAVS 541
           QTNLLALNAAIEAARAGE GRGFAVVADEVR L+ RT  S +++QT I  LQ     +V 
Sbjct: 467 QTNLLALNAAIEAARAGEAGRGFAVVADEVRNLAHRTQESAQQVQTMIEELQVGARESVD 526

Query: 542 VMTESHKLVETSVADVNQTGASLQAISEAIQQISDMATQIASAAEEQSLVTADINVNTES 601
            M +S +  + S+   NQ G  L +++  I +I  M   +A+A EEQ+ V   IN++   
Sbjct: 527 TMEQSQRHSQDSMQIANQAGERLDSVTVRIGEIDGMNQSVATATEEQTAVVEAINMDINE 586

Query: 602 VREVSDQLAEEAQQSVQQAKSLHAMAQELNKEISRFKL 639
           +  ++ +  E  Q +++    L   A  L   +  F++
Sbjct: 587 INMLNQEGVENLQATLRACSDLEQQAGRLKHLVGSFRI 624