Pairwise Alignments

Query, 639 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 688 a.a., Methyl-accepting chemotaxis transducer from Pseudomonas putida KT2440

 Score =  269 bits (688), Expect = 3e-76
 Identities = 185/516 (35%), Positives = 278/516 (53%), Gaps = 24/516 (4%)

Query: 135 WYKEAKAAGKPITTEPYVSVT--MQTLVVTLAEPVRYQGQLIGVAASNLALDKLIKDVLA 192
           W    +   +    EPY+      Q L+ ++A P+   G+++GV   ++ L  L +  L+
Sbjct: 186 WLTCPQDTARTCMLEPYLDEVNGRQVLMTSIALPLLEHGKVVGVVGLDIGLANLQQ--LS 243

Query: 193 IE-----VPGKGYAILVNQKGKIVAHPTQDLIL-KPTEEMSAQ--LTISKLNIAAKDHSL 244
           +        G+G   +    G +  +   D +L KP ++  A   L ++       D + 
Sbjct: 244 VNGRRDLFDGQGQVSIATAAGLLAGNSRDDSVLGKPMDKSVADGLLRVAHPFTPIPDTAP 303

Query: 245 FQLSMDGRDKVLMAEEVANTDWLLVMVMDKGVLEQPLNDMLMVQIGIGLGILLVMALLTS 304
           +Q+ ++  + VL A  VA     L   +D       L  +L     IGLG  +   LL  
Sbjct: 304 WQVVLELPESVLQAPAVA-----LNQRLDAHNQNANLTSLL-----IGLGTAIA-GLLLV 352

Query: 305 WFVARQLNE-LGNIANALADIAEGDGDLTRRLDVRSQDEVGLLADKFNKFVDRLHQMVKN 363
           W  AR +   +  +A  L DIA G+GDLTRRLD   QDE+G L   FN+F+D+L  ++  
Sbjct: 353 WLTARGVTRPILAVAARLEDIASGEGDLTRRLDYAHQDELGQLTGWFNRFLDKLQPVIAQ 412

Query: 364 VREVSVALTQGADHAAASATQASKRIRTQQDEITMVATAVTEMASATAEIASNAENTAKN 423
           V+         AD +AA A+Q S  ++ Q  EI  VATA  EM++   ++A NA   A+ 
Sbjct: 413 VKGSLQEARNTADQSAAIASQTSDGMQQQHREIEQVATAANEMSATALDVAHNASQAAQA 472

Query: 424 ATQSVQLGEDGFAQMQQSKQSIDQLAQELTGAVRIISELEVHANEISTILSTIRGIAEQT 483
           A  + Q  ++G   +  ++Q ID+LA  +  A+     LE  + +I ++L  IR IAEQT
Sbjct: 473 ARAADQASQEGLQLVDSTRQGIDRLAAGMNTAMDEARALEDRSGQIGSVLEVIRTIAEQT 532

Query: 484 NLLALNAAIEAARAGEQGRGFAVVADEVRVLSQRTHASTEEIQTKIAGLQKVTTTAVSVM 543
           NLLALNAAIEAARAGE GRGFAVVADEVR L+QRT  S EEI+  I GLQ+ T   V  M
Sbjct: 533 NLLALNAAIEAARAGEAGRGFAVVADEVRGLAQRTQVSVEEIRQVIEGLQQGTQDVVGAM 592

Query: 544 TESHKLVETSVADVNQTGASLQAISEAIQQISDMATQIASAAEEQSLVTADINVNTESVR 603
               +  + S A + Q   +LQ I EA+  ISDM  QIASAAEEQS V  ++N N   +R
Sbjct: 593 HAGQRQAQDSAARMEQALPALQRIGEAVAVISDMNLQIASAAEEQSAVAEEVNRNVAGIR 652

Query: 604 EVSDQLAEEAQQSVQQAKSLHAMAQELNKEISRFKL 639
           +V++ LA +A +S + +++L+ +A +    + +F++
Sbjct: 653 DVTESLAGQADESARISQALNRLANQQQALMEQFRV 688