Pairwise Alignments

Query, 639 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 544 a.a., Methyl-accepting chemotaxis protein McpP from Pseudomonas sp. DMC3

 Score =  242 bits (617), Expect = 4e-68
 Identities = 140/349 (40%), Positives = 205/349 (58%)

Query: 291 IGLGILLVMALLTSWFVARQLNELGNIANALADIAEGDGDLTRRLDVRSQDEVGLLADKF 350
           IGL I L+MALL        +  L    NA+A+IA G+ DLTR LD   +DEV  LA  F
Sbjct: 196 IGLAIALIMALLVILIARSIVRPLQETVNAMANIASGESDLTRSLDTHGKDEVTELAHHF 255

Query: 351 NKFVDRLHQMVKNVREVSVALTQGADHAAASATQASKRIRTQQDEITMVATAVTEMASAT 410
           N F  +L +++ +++  + AL Q +      A+QA +R + Q  ++ +VATA+ E+    
Sbjct: 256 NAFTAKLRRVIGDLQVSASALGQSSSELGNDASQAQQRSQQQSQQMELVATAINEVTYGV 315

Query: 411 AEIASNAENTAKNATQSVQLGEDGFAQMQQSKQSIDQLAQELTGAVRIISELEVHANEIS 470
            ++A NAE+ A     +    + G   +  S Q ID+L+  +  AV +I  L   + +I 
Sbjct: 316 QDVAKNAEHAAAEMRDAEAQAQQGQINIDGSLQQIDKLSGTIDQAVEVIRTLAAESTQIG 375

Query: 471 TILSTIRGIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRVLSQRTHASTEEIQTKIA 530
           ++L  IR IAEQTNLLALNAAIEAARAGEQGRGFAVVADEVR+L+QRT  ST EIQ+ I 
Sbjct: 376 SVLEVIRSIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRLLAQRTQKSTAEIQSMIE 435

Query: 531 GLQKVTTTAVSVMTESHKLVETSVADVNQTGASLQAISEAIQQISDMATQIASAAEEQSL 590
            LQ  +  AV V+ +S K  + ++      GASL AI +A++ ++ +   IASA  +Q+ 
Sbjct: 436 RLQNHSEAAVKVIGDSSKASQLTIEQAGLAGASLNAIGQALRNLNGLNASIASATLQQAQ 495

Query: 591 VTADINVNTESVREVSDQLAEEAQQSVQQAKSLHAMAQELNKEISRFKL 639
           V  DIN N      +S   A  A+QS   +  L  ++++LN  + +F++
Sbjct: 496 VVEDINQNVTQAAGLSHSTALAAEQSSAASLRLGQLSEQLNGLLRQFRV 544