Pairwise Alignments

Query, 639 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 715 a.a., Methyl-accepting chemotaxis protein McpU from Pseudomonas sp. DMC3

 Score =  258 bits (660), Expect = 5e-73
 Identities = 176/529 (33%), Positives = 288/529 (54%), Gaps = 29/529 (5%)

Query: 135 WYKEAKAAGKPITTEPYVSVT--MQTLVVTLAEPVRYQGQLIGVAASNLALDKLIKDVLA 192
           W+   +   KP   EPY  V    + L+ ++  P++  G++I    ++L++D  +  + A
Sbjct: 192 WFTCPRTTLKPCVIEPYFYVIDGHKVLMTSIVFPLQVNGKVI----ASLSVDINLNSLQA 247

Query: 193 IE-------VPGKGYAILVNQKGKIVAH-PTQDLILKPTEEMSAQLTISKLNIAAKDHSL 244
           I          G+    +V+  G +  + P    + +  + +        L + A    +
Sbjct: 248 ISQNASRKLYDGQTAVSIVSPAGLLAGYSPDAGKLSQRLDAVDQASGSELLRLLAASTGV 307

Query: 245 FQLSMDGRDKVLMAEEVA--NTDWLLVMVMDKGVL---EQPLNDML--------MVQIGI 291
             L  +G+ KVL   +       W +++ + + VL    + L   L        ++++ +
Sbjct: 308 SSLHSNGQLKVLSPFQPIPDGPAWGVLLDVPEKVLVSRAEALKQQLDASNTSGTLIELSL 367

Query: 292 GLGILLVMALLTSWFVARQLNE-LGNIANALADIAEGDGDLTRRLDVRSQDEVGLLADKF 350
           GL +  ++ LL  W +AR + + +  +A+ L DIA G+GDLTRRL     DE+G LA  F
Sbjct: 368 GL-LAALIGLLLVWLMARSVTKPILGVAHMLEDIASGEGDLTRRLAYDKHDELGQLAGWF 426

Query: 351 NKFVDRLHQMVKNVREVSVALTQGADHAAASATQASKRIRTQQDEITMVATAVTEMASAT 410
           NKF+D+L  ++  V+         AD ++A ATQ S  +  Q  ++  VATA  EM++  
Sbjct: 427 NKFLDKLQPIIAEVKRSVQDARNTADQSSAIATQTSAGMEQQYRQVDQVATASHEMSATA 486

Query: 411 AEIASNAENTAKNATQSVQLGEDGFAQMQQSKQSIDQLAQELTGAVRIISELEVHANEIS 470
            ++A +A   A+ A  + +    G   + ++  SID LA +++ A+  +  L  ++ +I 
Sbjct: 487 QDVARSAAQAAEAAKDADRATRQGLTVIDRTTASIDTLAADMSAAMVQVEGLAANSEKIG 546

Query: 471 TILSTIRGIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRVLSQRTHASTEEIQTKIA 530
           T+L TIR IAEQTNLLALNAAIEAARAGE GRGFAVVADEVR L++RT  S EE +  I 
Sbjct: 547 TVLETIRAIAEQTNLLALNAAIEAARAGEAGRGFAVVADEVRNLARRTQESVEETRQVIE 606

Query: 531 GLQKVTTTAVSVMTESHKLVETSVADVNQTGASLQAISEAIQQISDMATQIASAAEEQSL 590
            LQ  T   V  M  SH+  + SV  V Q   +L+ I +A+  ISDM  QIASAAEEQS 
Sbjct: 607 QLQNGTQEVVGSMGNSHRQAQGSVEQVGQAVTALRQIGDAVTVISDMNLQIASAAEEQSA 666

Query: 591 VTADINVNTESVREVSDQLAEEAQQSVQQAKSLHAMAQELNKEISRFKL 639
           V  +IN N  ++R+V++ L+ +A +S + ++SL+++A +  + + +F++
Sbjct: 667 VAEEINNNVATIRDVTESLSGQANESARVSQSLNSLANQQQRLMDQFRV 715