Pairwise Alignments

Query, 720 a.a., ornithine decarboxylase SpeF from Vibrio cholerae E7946 ATCC 55056

Subject, 768 a.a., Arginine decarboxylase (EC 4.1.1.19); Ornithine decarboxylase (EC 4.1.1.17); Lysine decarboxylase (EC 4.1.1.18) from Variovorax sp. SCN45

 Score =  339 bits (869), Expect = 3e-97
 Identities = 217/703 (30%), Positives = 345/703 (49%), Gaps = 37/703 (5%)

Query: 32  DIGAAVVSVEDVQNGIIDKMNATGLKLPIFV--AVCCEDQFPDDFCADITGVFELCDAKV 89
           D+  AV+S+ +     I ++      +PI++          P+D   ++ G   + +   
Sbjct: 74  DLDPAVLSLRN----FIGEVRRKNADVPIYIYGETKTSRHIPNDILRELHGFIHMFEDTP 129

Query: 90  EFYGKQVETAVRRYQESLLPPFFGTLKKYVDMGNSTFACPGHQGGQFFRKHPVGRQFFDF 149
           EF  + +    + Y E + PPFF  L  Y + G+ ++ CPGH GG  F K PVG+ F  F
Sbjct: 130 EFVARHIIREAKSYLEGVQPPFFKALIDYAEDGSYSWHCPGHSGGVAFLKSPVGQMFHQF 189

Query: 150 FGETLFRSDMCNADVRLGDLLIHEGAPHDAQAYAAKVYNADKTYFVLNGTSASNKVVCNA 209
           FGE + R+D+CNA   LG LL H G    ++  AA+++NAD  +FV NGTS SNK+V + 
Sbjct: 190 FGENMLRADVCNAVEELGQLLDHTGPVAASERNAARIFNADHCFFVTNGTSTSNKMVWHH 249

Query: 210 LLTPGDLVLFDRNNHKSNHHGALIQAGATPVYLETARNPFGFIGGIDTHCFNESYLRDAV 269
            + P D+V+ DRN HKS  H A+I  GA PV+++  RN FG IG I    F +S ++  +
Sbjct: 250 TVAPDDVVVVDRNCHKSILH-AIIMTGAIPVFMKPTRNHFGIIGPIPKSEFEQSAIKAKI 308

Query: 270 RNVDPSRAEA---KRPFRLAIIQLGTYDGTIYNARQVVDRIGHLCDYILFDSAWVGYEQF 326
           +  +P  A+    K   R+  +   TYDG IYN   + + +    D + FD AW+ +  F
Sbjct: 309 K-ANPLLADVDADKVKPRVMTLTQSTYDGVIYNTETIKNMLDGYVDTLHFDEAWLPHAAF 367

Query: 327 IPMMKDCSPL-LLDLKPEDPGIIVTQSVHKQQAGFSQTSQIHKKDHHIKGQERYCNHKRF 385
            P       +    ++P++  +  TQS HK  AG SQ S +  +D     Q R  +   F
Sbjct: 368 HPFYGAYHAMGKRRVRPKESLVFATQSTHKLLAGISQASHVLVQD----SQNRQLDRDLF 423

Query: 386 NNAFMLHASTSPFYPLFAALDVNAKMHEGDSGRYLWREAVKTGIEARKLLMKKCK----- 440
           N A+++H+STSP Y + A+ DV A M E   G  L  E++   ++ R+ + K  +     
Sbjct: 424 NEAYLMHSSTSPQYAIIASCDVAAAMMEPPGGTALVEESILEALDFRRAMRKVEEEFGKD 483

Query: 441 --YIKPFIPPMI------EGKPWQSHPTEQIADDLRFFEFEPGQKWHAFEGYEHGQYFVD 492
             + K + P  +        + W  H  +      +    +  + WH F     G   +D
Sbjct: 484 EWWFKVWGPEKLVDEGIGRAEDWIMHGEKNGPSKSK--SKKSPRNWHGFGELADGFNMLD 541

Query: 493 PCKFLLTTPGIDPETGEYEHFGIPATILANFLRENNIIPEKCDLNSILFLLTPAEDMAKM 552
           P K  + TPG+D E G +   GIPA+++  FL E+ +I EK  L S   + T      + 
Sbjct: 542 PIKSTIVTPGLDLE-GNFAETGIPASVVTKFLAEHGVIVEKTGLYSFFIMFTIGITKGRW 600

Query: 553 QHLVAQIARFERLIEEDAPLSEVLPNVYRANRERYKGYTIRQLCQEMHDLYVSHDVKQLQ 612
             L+  + +F+     + P+  +LP  +      Y+   +R LCQ +H LY  +DV +L 
Sbjct: 601 NTLLTALQQFKDDYARNQPMWRILPE-FCQQHPGYERLGLRDLCQHIHQLYARYDVARLT 659

Query: 613 KEMFRARYFPRAVMNPQEANLAFVRGQVELVPLREVEGRIAAEGALPYPPGVLCVVPGEI 672
            EM+ +   P   M P +A       + E V + E+EGRI      PYPPG+  ++PGE+
Sbjct: 660 TEMYLSDLTP--AMKPSDAFAHIAHRKTERVEIDELEGRITTSLITPYPPGIPLLIPGEV 717

Query: 673 WGGSVQRYFLALEEGINLLPGFAPELQGVY--LEPTGEGRVQA 713
           +   +  Y     E     PGF  ++ G+   ++ TG+ R  A
Sbjct: 718 FNKKIVDYLKFSREFNLQCPGFETDIHGLVARVDETGKKRYYA 760