Pairwise Alignments

Query, 720 a.a., ornithine decarboxylase SpeF from Vibrio cholerae E7946 ATCC 55056

Subject, 749 a.a., lysine decarboxylase from Pseudomonas putida KT2440

 Score =  355 bits (912), Expect = e-102
 Identities = 222/637 (34%), Positives = 325/637 (51%), Gaps = 28/637 (4%)

Query: 78  ITGVFELCDAKVEFYGKQVETAVRRYQESLLPPFFGTLKKYVDMGNSTFACPGHQGGQFF 137
           + G+  L +  V F  +QV  A   Y + LLPPFF  L ++    N ++  PGH GG  +
Sbjct: 118 LRGILYLFEDTVPFLARQVARAAHTYLDGLLPPFFKALVQHTAQSNYSWHTPGHGGGVAY 177

Query: 138 RKHPVGRQFFDFFGETLFRSDMCNADVRLGDLLIHEGAPHDAQAYAAKVYNADKTYFVLN 197
            K PVG+ F  FFGE   RSD+  +   LG LL H G   +A+A AA+ + AD T+FV+N
Sbjct: 178 HKSPVGQAFHQFFGENTLRSDLSVSVPELGSLLDHTGPLAEAEARAARNFGADHTFFVIN 237

Query: 198 GTSASNKVVCNALLTPGDLVLFDRNNHKSNHHGALIQAGATPVYLETARNPFGFIGGIDT 257
           GTS +NK+V +A++   DLVL DRN HKS  H A+I  GA P+YL   RN  G IG I  
Sbjct: 238 GTSTANKIVWHAMVGRDDLVLVDRNCHKSVVH-AIIMTGAIPLYLCPERNELGIIGPIPL 296

Query: 258 HCFNESYLRDAVRNVDPSRAEAKRPFRLAIIQLGTYDGTIYNARQVVDRIGHLCDYILFD 317
             F+   +   ++  +P   +  +  +LA++   TYDG  Y+A  +   +G   + + FD
Sbjct: 297 SEFSPEAIAAKIQ-ANPLARDRGQRIKLAVVTNSTYDGLCYHAGLIKQALGASVEVLHFD 355

Query: 318 SAWVGYEQFIPMMKDCSPLLLDLKPEDPGIIVTQSVHKQQAGFSQTSQIHKKDHHIKGQE 377
            AW  Y  F         +      + P +  T S HK  A FSQ S IH +D    G  
Sbjct: 356 EAWFAYAAFHDFFTGRYAMGTACAADSPLVFSTHSTHKLLAAFSQASMIHVQD----GAR 411

Query: 378 RYCNHKRFNNAFMLHASTSPFYPLFAALDVNAKMHEGDSGRYLWREAVKTGIEARKLLMK 437
           R  +  RFN AFM+H STSP Y + A+LDV + M EG +GR L +E     +  R+ L  
Sbjct: 412 RQLDRDRFNEAFMMHISTSPQYSILASLDVASTMMEGPAGRSLLQEMFDEALSFRRALAN 471

Query: 438 KCKYIKP-------FIPPMIEGKPWQSHPTEQIADDLRFFEFEPGQKWHAFEGYEHGQYF 490
             ++I         + PP  EG P         A D   +  +PG +WH F         
Sbjct: 472 LREHIAAADWWFSIWQPPSAEGIP------RLAAQD---WLLQPGAQWHGFGEVVTDYVL 522

Query: 491 VDPCKFLLTTPGIDPETGEYEHFGIPATILANFLRENNIIPEKCDLNSILFLLTPAEDMA 550
           +DP K  L  PG+  + G     GIPA +++ FL E  ++ EK  L S L L +      
Sbjct: 523 LDPLKVTLVMPGLSAD-GVLGARGIPAAVVSKFLWERGLVVEKTGLYSFLVLFSMGITKG 581

Query: 551 KMQHLVAQIARFERLIEEDAPLSEVLPNVYRANRERYKGYTIRQLCQEMHDLYVSHDVKQ 610
           K   L+ ++  F+R  + + PLS  LP+V  A+  RY+G  +R LC ++HD Y ++   +
Sbjct: 582 KWSTLLTELLEFKRHYDGNTPLSSCLPSVGAADALRYQGMGLRDLCDQLHDCYRANATAK 641

Query: 611 LQKEMFRARYFPRAVMNPQEANLAFVRGQVELVPLREVEGRIAAEGALPYPPGVLCVVPG 670
             K +F     P   ++P +A    VRG+VE VP+  + GR+AA   +PYPPG+  ++PG
Sbjct: 642 QLKRLFTR--LPEVAVSPAQAYDKMVRGEVEAVPIEALLGRVAAVMLVPYPPGIPLIMPG 699

Query: 671 EIWGGSVQRY--FLALEEGINL-LPGFAPELQGVYLE 704
           E +  + +    +LA     N   PGF  ++ G+  E
Sbjct: 700 ERFTEATRSILDYLAFARAFNQGFPGFVADVHGLQHE 736