Pairwise Alignments

Query, 720 a.a., ornithine decarboxylase SpeF from Vibrio cholerae E7946 ATCC 55056

Subject, 714 a.a., lysine decarboxylase LdcC from Serratia liquefaciens MT49

 Score =  301 bits (770), Expect = 1e-85
 Identities = 202/624 (32%), Positives = 303/624 (48%), Gaps = 32/624 (5%)

Query: 94  KQVETAVRRYQESLLPPFFGTLKKYVDMGNSTFACPGHQGGQFFRKHPVGRQFFDFFGET 153
           ++++     Y +++ PP    L  YV  G  TF  PGH  G  F+K PVG  F+DFFG  
Sbjct: 115 QRIQQYTAEYIDTITPPLTKALFNYVHEGKYTFCTPGHMAGTAFQKSPVGCLFYDFFGAN 174

Query: 154 LFRSDMCNADVRLGDLLIHEGAPHDAQAYAAKVYNADKTYFVLNGTSASNKVVCNALLTP 213
             ++D+  +   LG LL H G   +A+ Y A+ +NA+++Y V NGTS +NK+V       
Sbjct: 175 TLKADVSISVTELGSLLDHIGPHLEAEEYIARTFNAEQSYLVTNGTSTANKIVGMYSAPT 234

Query: 214 GDLVLFDRNNHKSNHHGALIQAGATPVYLETARNPFGFIGGIDTHCFNESYLRDAVRNVD 273
           G  VL DRN HKS  H  L+ +   P+YL   RN +G +GGI        +  D++    
Sbjct: 235 GSTVLIDRNCHKSLCH-LLMMSDIVPIYLRPLRNAYGILGGIP----QREFTHDSIAARV 289

Query: 274 PSRAEAKRPFRLAIIQLGTYDGTIYNARQVVDRIGHLCDYILFDSAWVGYEQFIPMMKDC 333
              A A  P   A+I   TYDG +YN   +   +      I FDSAWV Y  F P+    
Sbjct: 290 ADTANASWPVH-AVITNSTYDGLLYNTDYIKQTLD--VPSIHFDSAWVPYTNFHPIYDGK 346

Query: 334 SPLLLDLKPEDPGIIVTQSVHKQQAGFSQTSQIHKKDHHIKGQERYCNHKRFNNAFMLHA 393
           S +  +  P    I  TQS HK  A FSQ S I     HIKG     +   FN A+M+H 
Sbjct: 347 SGMSGERIP-GKVIYETQSTHKLLAAFSQASMI-----HIKGD---YDESTFNEAYMMHT 397

Query: 394 STSPFYPLFAALDVNAKMHEGDSGRYLWREAVKTGIEARKLLMKKCKYIKPFIPPMIEGK 453
           +TSP Y + A+++  A M  G+ GR L   +V+  +  R+ + +  +    +   +    
Sbjct: 398 TTSPNYGIVASMETAAAMLRGNPGRRLINRSVERALHFRREVQRLREESDSWFFDI---- 453

Query: 454 PWQSHPTEQIADDLRFFEFEPGQKWHAFEGYEHGQYFVDPCKFLLTTPGIDPETGEYEHF 513
            WQ  P E   D+ + +   P   WH F   +    ++DP K  + TPG++ E G  E  
Sbjct: 454 -WQ--PEE--IDEAQCWPLNPDDNWHGFGNTDRDHMYLDPIKVTILTPGMN-ELGALEES 507

Query: 514 GIPATILANFLRENNIIPEKCDLNSILFLLTPAEDMAKMQHLVAQIARFERLIEEDAPLS 573
           GIPA ++A +L E  I+ EK    ++LFL +   D  K   L+  +  F+R  + +  + 
Sbjct: 508 GIPAALVAKYLDERGIVVEKTGPYNLLFLFSIGIDKTKAMSLLRGLTDFKRAYDLNLRVK 567

Query: 574 EVLPNVYRANRERYKGYTIRQLCQEMHDLYVSHDVKQLQKEMFRARYFPRAVMNPQEANL 633
            +LP++Y  + + Y+   I+ L   +H L   HD+  L +  F     P   + P +   
Sbjct: 568 NMLPDLYAEDPDFYRNMRIQDLAAGIHRLICRHDLPGLMQRAFDV--LPEMKLTPHQMFQ 625

Query: 634 AFVRGQVELVPLREVEGRIAAEGALPYPPGVLCVVPGEI---WGGSVQRYFLALEEGINL 690
             VRG VE   L ++ G++AA   LPYPPGV  V+PGE+      +V  + L L      
Sbjct: 626 QQVRGNVETCELDQLVGKVAANMILPYPPGVPLVMPGEMITEESRAVLDFLLMLCSIGER 685

Query: 691 LPGFAPELQGVYLEPTGEGRVQAM 714
            PGF  ++ G  L   G   V+ +
Sbjct: 686 YPGFETDIHGAKLTEDGRYLVKVL 709