Pairwise Alignments

Query, 720 a.a., ornithine decarboxylase SpeF from Vibrio cholerae E7946 ATCC 55056

Subject, 714 a.a., Lysine decarboxylase, inducible (EC 4.1.1.18) from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score =  318 bits (816), Expect = 5e-91
 Identities = 210/616 (34%), Positives = 310/616 (50%), Gaps = 34/616 (5%)

Query: 103 YQESLLPPFFGTLKKYVDMGNSTFACPGHQGGQFFRKHPVGRQFFDFFGETLFRSDMCNA 162
           Y +++LPP    L KYV  G  TF  PGH GG  F+K PVG  F+DFFG    +SD+  +
Sbjct: 124 YIDNILPPLTKALFKYVREGKYTFCTPGHMGGTAFQKSPVGSIFYDFFGPNTMKSDISIS 183

Query: 163 DVRLGDLLIHEGAPHDAQAYAAKVYNADKTYFVLNGTSASNKVVCNALLTPGDLVLFDRN 222
              LG LL H G   +A+ Y A+V+NA+++Y V NGTS +NK+V       G  VL DRN
Sbjct: 184 VSELGSLLDHSGPHKEAEEYIARVFNAERSYMVTNGTSTANKIVGMYSAPAGSTVLIDRN 243

Query: 223 NHKSNHHGALIQAGATPVYLETARNPFGFIGGIDTHCFNESYLRDAVRNVDPSRAEAKRP 282
            HKS  H  ++ +  TP+Y    RN +G +GGI    F  + +   V+        A  P
Sbjct: 244 CHKSLTH-LMMMSDITPIYFRPTRNAYGILGGIPQSEFQHATIAKRVKET----PNATWP 298

Query: 283 FRLAIIQLGTYDGTIYNARQVVDRIGHLCDYILFDSAWVGYEQFIPMMKDCSPLLLDLKP 342
              A+I   TYDG +YN   +   +      I FDSAWV Y  F P+ +    +  D + 
Sbjct: 299 VH-AVITNSTYDGLLYNTDYIKKTLD--VKSIHFDSAWVPYTNFSPIYQGKCGMSGD-RV 354

Query: 343 EDPGIIVTQSVHKQQAGFSQTSQIHKKDHHIKGQERYCNHKRFNNAFMLHASTSPFYPLF 402
           E   I  TQS HK  A FSQ S I     H+KG     N + FN A+M+H +TSP Y + 
Sbjct: 355 EGKIIYETQSTHKLLAAFSQASMI-----HVKGD---INEETFNEAYMMHTTTSPHYGIV 406

Query: 403 AALDVNAKMHEGDSGRYLWREAVKTGIEARKLLMKKCKYIKPFIPPMIEGKPWQSHPTEQ 462
           A+ +  A M +G++G+ L   +++  I+ RK + +        +    +G  +     E 
Sbjct: 407 ASTETAAAMMKGNAGKRLINGSIERAIKFRKEIKR--------LKSESDGWFFDVWQPEH 458

Query: 463 IADDLRFFEFEPGQKWHAFEGYEHGQYFVDPCKFLLTTPGIDPETGEYEHFGIPATILAN 522
           I D    +       WH F+  ++   ++DP K  + TPG+  + G  + FGIPA+++A 
Sbjct: 459 I-DGAECWPLRSDSAWHGFKNIDNEHMYLDPIKVTILTPGMKKD-GTMDEFGIPASLVAK 516

Query: 523 FLRENNIIPEKCDLNSILFLLTPAEDMAKMQHLVAQIARFERLIEEDAPLSEVLPNVYRA 582
           +L E  II EK    ++LFL +   D  K   L+  +  F+R  + +  +  +LP +YR 
Sbjct: 517 YLDERGIIVEKTGPYNLLFLFSIGIDKTKALSLLRALTEFKRAFDLNLRVKNILPALYRE 576

Query: 583 NRERYKGYTIRQLCQEMHDLYVSHDVKQLQKEMFRA-RYFPRAVMNPQEANLAFVRGQVE 641
             E Y+   I++L Q +H L   H++  L   M+RA    P+ VM P  A    + G+ E
Sbjct: 577 APEFYENMRIQELAQNIHKLVEHHNLPDL---MYRAFEVLPKMVMTPYTAFQKELHGETE 633

Query: 642 LVPLREVEGRIAAEGALPYPPGVLCVVPGEI---WGGSVQRYFLALEEGINLLPGFAPEL 698
            V L E+ GR+ A   LPYPPGV  V+PGE+       V  +   L E     PGF  ++
Sbjct: 634 EVYLEEMVGRVNANMILPYPPGVPLVMPGEMITEESRPVLEFLQMLCEIGAHYPGFETDI 693

Query: 699 QGVYLEPTGEGRVQAM 714
            G Y +  G   V+ +
Sbjct: 694 HGAYRQADGRYTVKVL 709