Pairwise Alignments

Query, 720 a.a., ornithine decarboxylase SpeF from Vibrio cholerae E7946 ATCC 55056

Subject, 633 a.a., Arginine/lysine/ornithine decarboxylases from Kangiella aquimarina DSM 16071

 Score =  167 bits (422), Expect = 2e-45
 Identities = 179/669 (26%), Positives = 269/669 (40%), Gaps = 130/669 (19%)

Query: 32  DIGAAVVSVEDVQNGI-------IDKMNATGLKLPIFVAVCCEDQFPDDFCADITGVFEL 84
           DI A ++S +  +N I       I ++ +  L+LP++V          D    +  V E 
Sbjct: 58  DIQAVILSWQIRENAIANRYAQFISELKSIRLELPVYVL--------GDDSKGLDIVNES 109

Query: 85  CDAKVEFYGKQVET--------AVRRYQESLLPPFFGTLKKYVDMGNSTFACPGHQGGQF 136
            D +  F+   V +         +  + +    PF+   K+YV   N ++  PGH GG  
Sbjct: 110 EDIESFFFKDDVLSDPESILGYIINDFDDRCETPFWTAYKRYVAESNDSWHTPGHSGGAS 169

Query: 137 FRKHPVGRQFFDFFGETLFRSDMCNADVRLGDLLIHEGAPHDAQAYAAKVYNADKTYFVL 196
           FR  P  R F+ F+G  +F  D+  +   LG L         AQ  AA  +   +TYFV 
Sbjct: 170 FRNSPYIRDFYQFYGRNVFVGDLSVSVDSLGSLSDSTNYIGRAQQAAATTFEVKRTYFVT 229

Query: 197 NGTSASNKVVCNALLTPGDLVLFDRNNHKSNHHGALIQAGATPVYLETARNP-FGFIGGI 255
           NG+S SNK++   LL  GD V+ DRN HKS H+G ++Q+G+ P+YL +  NP +G     
Sbjct: 230 NGSSTSNKIILQTLLRKGDKVIIDRNCHKSVHYG-ILQSGSMPIYLSSILNPKYGI---- 284

Query: 256 DTHCFNESYLRDAVRNVDPSRAEAKRPFRLAIIQLGTYDGTIYNARQVVDRIGHLCDYIL 315
               F    L D  R ++ +  +AK    L ++   TYDG + + +QVV+        + 
Sbjct: 285 ----FAPPSLADMKRAIEQN-PDAK----LLVLTGCTYDGLLSDLKQVVNLAHSHNIKVF 335

Query: 316 FDSAWVGYEQFIPMMKDCSPLLLDLKPEDPGIIVTQSVHKQQAGFSQTSQIHKKDHHIKG 375
            D AW  Y  F P  +  S +            VT S HK  + FSQ S IH  D     
Sbjct: 336 IDEAWFAYSLFHPQFRYYSAINAGAD------YVTHSAHKVVSAFSQASYIHINDPEF-- 387

Query: 376 QERYCNHKRFNNAFMLHASTSPFYPLFAALDVNAKMHEGDSGRYLWREAVKTGIEARKLL 435
                +   F   F ++ASTSP Y L A+LDV  K  E               +E  K+L
Sbjct: 388 -----DEDFFREIFSIYASTSPKYQLIASLDVCHKQLE---------------MEGYKIL 427

Query: 436 MKKCKYIKPFIPPMIEGKPWQSHPTEQIADDLRFFEFEPGQKWHAFEGYEHGQYFVDPCK 495
                ++  F               +Q+A   +    +     H F  +E      DP K
Sbjct: 428 NSLLNHVAEF--------------KQQMASLNKIKVLDGEDFKHIFPHFESDNMGHDPLK 473

Query: 496 FLLTTPGIDPETGEYEHFGIPATILANFLRENNIIPEKCDLNSILFLLTPAEDMAKMQHL 555
            L     ID     Y H  I   +L     E  +  EK   ++IL LLT     +K+  L
Sbjct: 474 IL-----IDISELPYSHKDIHKYLLD----EVGLEIEKYTHSTILVLLTLGGTRSKIIRL 524

Query: 556 VAQIARFERLIEEDAPLSEVLPNVYRANRERYKGYTIRQLCQEMHDLYVSHDVKQLQKEM 615
                 +  L + D+   ++  +  R+               ++ D     ++  L  E 
Sbjct: 525 ------YNALKKLDSGRVKLTTSSRRS---------------KIPDNLPPIELACLPNEA 563

Query: 616 FRARYFPRAVMNPQEANLAFVRGQVELVPLREVEGRIAAEGALPYPPGVLCVVPGEIWGG 675
           F                     G+ E +P+ E E RI A    PYPPG+  +VPG+I   
Sbjct: 564 FF--------------------GERECIPISETENRICAGLVTPYPPGIPLLVPGQIIRR 603

Query: 676 SVQRYFLAL 684
               Y  AL
Sbjct: 604 QQLDYLAAL 612